RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 LMOD3Q0VAK6 560 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 KIAA2012Q0VF49 1180 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 GRAPQ13588 217 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 DLK2Q6UY11 383 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.52
RPS3A-206ENST00000507485 USP50Q70EL3 339 aaPredicted RBP11.77□□□□□ -0.52
RPS3A-206ENST00000507485 MPNDQ8N594 471 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.52
RPS3A-206ENST00000507485 WNT2BQ93097 391 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 ISCA1Q9BUE6 129 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 CRISPLD2Q9H0B8 497 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 PRDM10Q9NQV6 1147 aa11.77□□□□□ -0.52
RPS3A-206ENST00000507485 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
RPS3A-206ENST00000507485 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 BBOX1O75936 387 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 RAD17O75943 681 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
RPS3A-206ENST00000507485 HSP90AB3PQ58FF7 597 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 CYP4F22Q6NT55 531 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 CELF1Q92879 486 aaKnown RBP11.76□□□□□ -0.53
RPS3A-206ENST00000507485 RUNDC1Q96C34 613 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 CAPNS2Q96L46 248 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 ZBED2Q9BTP6 218 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 GLIS2Q9BZE0 524 aaPredicted RBP11.76□□□□□ -0.53
RPS3A-206ENST00000507485 VPS33BQ9H267 617 aa11.76□□□□□ -0.53
RPS3A-206ENST00000507485 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
RPS3A-206ENST00000507485 AOC2O75106 756 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
RPS3A-206ENST00000507485 CIAPIN1Q6FI81 312 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
RPS3A-206ENST00000507485 GPR101Q96P66 508 aaPredicted RBP11.75□□□□□ -0.53
RPS3A-206ENST00000507485 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 KCNQ5Q9NR82 932 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 PGAP2Q9UHJ9 254 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 TLL2Q9Y6L7 1015 aa11.75□□□□□ -0.53
RPS3A-206ENST00000507485 EGFRP00533 1210 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 GRM1Q13255 1194 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 SUPT20HQ8NEM7 779 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 PHAXQ9H814 394 aaKnown RBP11.74□□□□□ -0.53
RPS3A-206ENST00000507485 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
RPS3A-206ENST00000507485 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
RPS3A-206ENST00000507485 PDE4AP27815 886 aa11.73□□□□□ -0.53
RPS3A-206ENST00000507485 GPSM2P81274 684 aa11.73□□□□□ -0.53
RPS3A-206ENST00000507485 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
RPS3A-206ENST00000507485 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
RPS3A-206ENST00000507485 DBNDD1Q9H9R9 158 aa11.73□□□□□ -0.53
RPS3A-206ENST00000507485 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
RPS3A-206ENST00000507485 CELF2O95319 508 aaKnown RBP11.72□□□□□ -0.53
RPS3A-206ENST00000507485 HOXB7P09629 217 aa11.72□□□□□ -0.53
RPS3A-206ENST00000507485 PAXIP1Q6ZW49 1069 aaPredicted RBP11.72□□□□□ -0.53
RPS3A-206ENST00000507485 SAPCD2Q86UD0 394 aa11.72□□□□□ -0.53
RPS3A-206ENST00000507485 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
RPS3A-206ENST00000507485 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
RPS3A-206ENST00000507485 CNOT7Q9UIV1 285 aaKnown RBP11.72□□□□□ -0.53
RPS3A-206ENST00000507485 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
RPS3A-206ENST00000507485 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.53
RPS3A-206ENST00000507485 PSMD14O00487 310 aa11.71□□□□□ -0.53
RPS3A-206ENST00000507485 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
RPS3A-206ENST00000507485 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.533e-6■■■■□ 21.3
RPS3A-206ENST00000507485 SAMD7Q7Z3H4 446 aa11.71□□□□□ -0.53
RPS3A-206ENST00000507485 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
RPS3A-206ENST00000507485 ZIC5Q96T25 663 aa11.71□□□□□ -0.53
RPS3A-206ENST00000507485 BCL2L13Q9BXK5 485 aa11.71□□□□□ -0.53
RPS3A-206ENST00000507485 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
RPS3A-206ENST00000507485 PRKRIP1Q9H875 184 aaPredicted RBP11.71□□□□□ -0.53
RPS3A-206ENST00000507485 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
RPS3A-206ENST00000507485 ELL2O00472 640 aaPredicted RBP11.7□□□□□ -0.54
RPS3A-206ENST00000507485 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
RPS3A-206ENST00000507485 EVI5O60447 810 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 TRIM28Q13263 835 aaKnown RBP11.7□□□□□ -0.54
RPS3A-206ENST00000507485 TNIP1Q15025 636 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
RPS3A-206ENST00000507485 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
RPS3A-206ENST00000507485 APAF1O14727 1248 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 USP48Q86UV5 1035 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
RPS3A-206ENST00000507485 ASTN2O75129 1339 aaPredicted RBP11.69□□□□□ -0.54
RPS3A-206ENST00000507485 WTIPA6NIX2 430 aaPredicted RBP11.69□□□□□ -0.54
RPS3A-206ENST00000507485 ECE2O60344 883 aa11.69□□□□□ -0.54
RPS3A-206ENST00000507485 ECE1P42892 770 aa11.69□□□□□ -0.54
RPS3A-206ENST00000507485 TBC1D10BQ4KMP7 808 aaPredicted RBP11.69□□□□□ -0.54
RPS3A-206ENST00000507485 TBC1D16Q8TBP0 767 aa11.69□□□□□ -0.54
RPS3A-206ENST00000507485 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
RPS3A-206ENST00000507485 ABHD8Q96I13 439 aa11.69□□□□□ -0.54
RPS3A-206ENST00000507485 C6orf229H3BNL8 230 aa11.68□□□□□ -0.54
RPS3A-206ENST00000507485 RPS8P62241 208 aaKnown RBP11.68□□□□□ -0.54
RPS3A-206ENST00000507485 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms