RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 KCNQ2O43526 872 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 CPA1P15085 419 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 ME3Q16798 604 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 CCDC129Q6ZRS4 1044 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 FBXL16Q8N461 479 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 TMEM87AQ8NBN3 555 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 GZF1Q9H116 711 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 TPCN1Q9ULQ1 816 aa20.53■□□□□ 0.88
TRAPPC11-204ENST00000505676 ZAP70P43403 619 aa20.52■□□□□ 0.88
TRAPPC11-204ENST00000505676 UBE3CQ15386 1083 aa20.52■□□□□ 0.88
TRAPPC11-204ENST00000505676 DHX32Q7L7V1 743 aaKnown RBP20.52■□□□□ 0.88
TRAPPC11-204ENST00000505676 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
TRAPPC11-204ENST00000505676 TOB2Q14106 344 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC11-204ENST00000505676 NYXQ9GZU5 481 aa20.51■□□□□ 0.87
TRAPPC11-204ENST00000505676 MYH7P12883 1935 aa20.51■□□□□ 0.87
TRAPPC11-204ENST00000505676 SYT1P21579 422 aa20.51■□□□□ 0.87
TRAPPC11-204ENST00000505676 GJB2P29033 226 aa20.51■□□□□ 0.87
TRAPPC11-204ENST00000505676 RPS6KA4O75676 772 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 NCLP19338 710 aaKnown RBP20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 MCAMP43121 646 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 SF3B3Q15393 1217 aaKnown RBP20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 CCDC102BQ68D86 513 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 LARGE1O95461 756 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 IMMTQ16891 758 aaKnown RBP20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 OSBP2Q969R2 916 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 LLPHQ9BRT6 129 aaKnown RBP20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 AGXT2Q9BYV1 514 aa20.5■□□□□ 0.87
TRAPPC11-204ENST00000505676 F13A1P00488 732 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 ADD2P35612 726 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 ZNF445P59923 1031 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 SYAP1Q96A49 352 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 AKAP11Q9UKA4 1901 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 M0R2C6 588 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 NARFQ9UHQ1 456 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 BTAF1O14981 1849 aa20.49■□□□□ 0.87
TRAPPC11-204ENST00000505676 WDR19Q8NEZ3 1342 aa20.48■□□□□ 0.87
TRAPPC11-204ENST00000505676 SCARF1Q14162 830 aa20.48■□□□□ 0.87
TRAPPC11-204ENST00000505676 KIF3AQ9Y496 699 aa20.48■□□□□ 0.87
TRAPPC11-204ENST00000505676 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
TRAPPC11-204ENST00000505676 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC11-204ENST00000505676 GJD4Q96KN9 370 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC11-204ENST00000505676 ZMYM6O95789 1325 aa20.47■□□□□ 0.87
TRAPPC11-204ENST00000505676 EXOSC10Q01780 885 aaKnown RBP20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 ST3GAL1Q11201 340 aa20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 Q6ZUG5 572 aa20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 E7EWF7 191 aa20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 FGD1P98174 961 aa20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 MEX3CQ5U5Q3 659 aaKnown RBP20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 MTMR6Q9Y217 621 aa20.46■□□□□ 0.87
TRAPPC11-204ENST00000505676 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 GRPEL1Q9HAV7 217 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 TAF6LQ9Y6J9 622 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 GPAA1O43292 621 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 PHKA1P46020 1223 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 ANKRD18AQ8IVF6 992 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 SPATA5Q8NB90 893 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 CERKQ8TCT0 537 aa20.45■□□□□ 0.86
TRAPPC11-204ENST00000505676 LY75O60449 1722 aa20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 PFKFB2O60825 505 aa20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 CHGBP05060 677 aa20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 HMGN5P82970 282 aaKnown RBP20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 STOX1Q6ZVD7 989 aa20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZNF274Q96GC6 653 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 RTCBQ9Y3I0 505 aaKnown RBP20.44■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZBTB22O15209 634 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZPR1O75312 459 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 PHF14O94880 888 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 SLC9C2Q5TAH2 1124 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 BSDC1Q9NW68 430 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 TRPC5Q9UL62 973 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 EVCP57679 992 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 UBE4AQ14139 1066 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 ALX1Q15699 326 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 NECAB1Q8N987 351 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 SEC31BQ9NQW1 1179 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 GNL3LQ9NVN8 582 aaKnown RBP20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 DOCK2Q92608 1830 aa20.43■□□□□ 0.86
TRAPPC11-204ENST00000505676 FOXD4L5Q5VV16 416 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 FOXD4L4Q8WXT5 416 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 FAM177BA6PVY3 158 aa20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 PDE6AP16499 860 aa20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 CHRNDQ07001 517 aa20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 TMED8Q6PL24 325 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 GPT2Q8TD30 523 aa20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 SETDB2Q96T68 719 aa20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 PUS7LQ9H0K6 701 aaKnown RBP20.42■□□□□ 0.86
TRAPPC11-204ENST00000505676 ZNF213O14771 459 aa20.41■□□□□ 0.86
TRAPPC11-204ENST00000505676 XRCC6P12956 609 aaKnown RBP eCLIP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms