RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 HACL1Q9UJ83 578 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 ABT1Q9ULW3 272 aaKnown RBP11.47□□□□□ -0.57
TPM3-218ENST00000505010 CACNA1SQ13698 1873 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 PDE1AP54750 535 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 PRR5LQ6MZQ0 368 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.57
TPM3-218ENST00000505010 GPATCH3Q96I76 525 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 PUS3Q9BZE2 481 aaKnown RBP11.46□□□□□ -0.57
TPM3-218ENST00000505010 SEC31BQ9NQW1 1179 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
TPM3-218ENST00000505010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.46□□□□□ -0.57
TPM3-218ENST00000505010 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 AOX1Q06278 1338 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 EPHX2P34913 555 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
TPM3-218ENST00000505010 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 BMP2KLQ5H9B9 411 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 MAP1SQ66K74 1059 aaPredicted RBP11.45□□□□□ -0.58
TPM3-218ENST00000505010 PRPF40BQ6NWY9 871 aaKnown RBP11.45□□□□□ -0.58
TPM3-218ENST00000505010 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
TPM3-218ENST00000505010 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
TPM3-218ENST00000505010 SCN4AP35499 1836 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 GSPT1P15170 499 aaKnown RBP11.44□□□□□ -0.58
TPM3-218ENST00000505010 IGHMBP2P38935 993 aaKnown RBP11.44□□□□□ -0.58
TPM3-218ENST00000505010 ECE1P42892 770 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 C8orf34Q49A92 452 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 METTL24Q5JXM2 366 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
TPM3-218ENST00000505010 EAF2Q96CJ1 260 aaPredicted RBP11.44□□□□□ -0.58
TPM3-218ENST00000505010 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 CCDC8Q9H0W5 538 aaPredicted RBP11.44□□□□□ -0.58
TPM3-218ENST00000505010 OSBPL3Q9H4L5 887 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
TPM3-218ENST00000505010 STAP2Q9UGK3 403 aa11.44□□□□□ -0.58
TPM3-218ENST00000505010 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
TPM3-218ENST00000505010 SRGNP10124 158 aa11.43□□□□□ -0.58
TPM3-218ENST00000505010 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
TPM3-218ENST00000505010 BACH2Q9BYV9 841 aa11.43□□□□□ -0.58
TPM3-218ENST00000505010 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
TPM3-218ENST00000505010 ECHDC1Q9NTX5 307 aa11.43□□□□□ -0.58
TPM3-218ENST00000505010 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
TPM3-218ENST00000505010 MROH5Q6ZUA9 1318 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 GRM1Q13255 1194 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 DDX46Q7L014 1031 aaKnown RBP11.42□□□□□ -0.58
TPM3-218ENST00000505010 ANKRD18AQ8IVF6 992 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 RPGRQ92834 1020 aaKnown RBP11.42□□□□□ -0.58
TPM3-218ENST00000505010 CAPNS2Q96L46 248 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 GPR108Q9NPR9 543 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 DBNLQ9UJU6 430 aaKnown RBP11.42□□□□□ -0.58
TPM3-218ENST00000505010 RIPOR2Q9Y4F9 1068 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
TPM3-218ENST00000505010 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 A0A1B0GUL7 405 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 ERC2O15083 957 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 CDC45O75419 566 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
TPM3-218ENST00000505010 ATP2B3Q16720 1220 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 CELF1Q92879 486 aaKnown RBP11.41□□□□□ -0.58
TPM3-218ENST00000505010 DBNDD2Q9BQY9 259 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
TPM3-218ENST00000505010 AKAP2Q9Y2D5 859 aa11.41□□□□□ -0.58
TPM3-218ENST00000505010 GLRX3O76003 335 aaKnown RBP11.4□□□□□ -0.58
TPM3-218ENST00000505010 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
TPM3-218ENST00000505010 SDSP20132 328 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 CYP4F22Q6NT55 531 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 GPC2Q8N158 579 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
TPM3-218ENST00000505010 C7orf43Q8WVR3 580 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 MCOLN1Q9GZU1 580 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 TSKSQ9UJT2 592 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 MYH7P12883 1935 aa11.4□□□□□ -0.58
TPM3-218ENST00000505010 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 PDE8BO95263 885 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 ADORA1P30542 326 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 MAP2K2P36507 400 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 TIMM10P62072 90 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 PUM3Q15397 648 aaKnown RBP11.39□□□□□ -0.59
TPM3-218ENST00000505010 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 RILPL2Q969X0 211 aa11.39□□□□□ -0.59
TPM3-218ENST00000505010 FZD9O00144 591 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 CA12O43570 354 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 TAF5LO75529 589 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 SLC5A1P13866 664 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 RPS8P62241 208 aaKnown RBP11.38□□□□□ -0.59
TPM3-218ENST00000505010 CHRNDQ07001 517 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms