RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 EXOC6BQ9Y2D4 811 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 FARP1Q9Y4F1 1045 aaPredicted RBP6.15□□□□□ -1.42
LMNB1-208ENST00000504788 ZNF804BA4D1E1 1349 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 XDHP47989 1333 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 MROH5Q6ZUA9 1318 aa6.15□□□□□ -1.42
LMNB1-208ENST00000504788 IL15P40933 162 aaPredicted RBP6.15□□□□□ -1.43
LMNB1-208ENST00000504788 CC2D2BQ6DHV5 1058 aa6.15□□□□□ -1.43
LMNB1-208ENST00000504788 KLHL34Q8N239 644 aa6.15□□□□□ -1.43
LMNB1-208ENST00000504788 HELBQ8NG08 1087 aaPredicted RBP6.15□□□□□ -1.43
LMNB1-208ENST00000504788 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.43
LMNB1-208ENST00000504788 SIL1Q9H173 461 aa6.15□□□□□ -1.43
LMNB1-208ENST00000504788 GPR108Q9NPR9 543 aa6.15□□□□□ -1.43
LMNB1-208ENST00000504788 MED23Q9ULK4 1368 aa6.15□□□□□ -1.43
LMNB1-208ENST00000504788 SURF6O75683 361 aaKnown RBP6.14□□□□□ -1.43
LMNB1-208ENST00000504788 IGHMBP2P38935 993 aaKnown RBP6.14□□□□□ -1.43
LMNB1-208ENST00000504788 KIAA2012Q0VF49 1180 aa6.14□□□□□ -1.43
LMNB1-208ENST00000504788 TFCP2Q12800 502 aa6.14□□□□□ -1.43
LMNB1-208ENST00000504788 ERICH6BQ5W0A0 696 aa6.14□□□□□ -1.43
LMNB1-208ENST00000504788 RHPN1Q8TCX5 695 aa6.14□□□□□ -1.43
LMNB1-208ENST00000504788 FAM84BQ96KN1 310 aaPredicted RBP6.14□□□□□ -1.43
LMNB1-208ENST00000504788 GPR101Q96P66 508 aaPredicted RBP6.14□□□□□ -1.43
LMNB1-208ENST00000504788 CHMP3Q9Y3E7 222 aa6.14□□□□□ -1.43
LMNB1-208ENST00000504788 YDJCA8MPS7 323 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 FKBP4Q02790 459 aaKnown RBP eCLIP6.13□□□□□ -1.43
LMNB1-208ENST00000504788 RASSF7Q02833 373 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 GRIPAP1Q4V328 841 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 CCDC93Q567U6 631 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 TNNI3KQ59H18 835 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 FBXO33Q7Z6M2 555 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 RTKN2Q8IZC4 609 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 MPNDQ8N594 471 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 ZNF579Q8NAF0 562 aaKnown RBP6.13□□□□□ -1.43
LMNB1-208ENST00000504788 MPHOSPH8Q99549 860 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 TLR7Q9NYK1 1049 aaKnown RBP6.13□□□□□ -1.43
LMNB1-208ENST00000504788 DBNLQ9UJU6 430 aaKnown RBP6.13□□□□□ -1.43
LMNB1-208ENST00000504788 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
LMNB1-208ENST00000504788 LEMD3Q9Y2U8 911 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 FPGT-TNNI3KV9GXZ4 949 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 ADAMTSL1Q8N6G6 1762 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 A0A1B0GUL7 405 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 HMMRO75330 724 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 TIMM10P62072 90 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 SOGA3Q5TF21 947 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 OTUD7AQ8TE49 926 aaPredicted RBP6.13□□□□□ -1.43
LMNB1-208ENST00000504788 ANKRD2Q9GZV1 360 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 VPS33BQ9H267 617 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 KCNQ5Q9NR82 932 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 CNNM1Q9NRU3 951 aa6.13□□□□□ -1.43
LMNB1-208ENST00000504788 FZD9O00144 591 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 RAB11FIP3O75154 756 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 IL1R1P14778 569 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 ATP2B4P23634 1241 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 PDE4AP27815 886 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 ADORA1P30542 326 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 NUCB1Q02818 461 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 SCARF1Q14162 830 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 PUM3Q15397 648 aaKnown RBP6.12□□□□□ -1.43
LMNB1-208ENST00000504788 DPP8Q6V1X1 898 aaPredicted RBP6.12□□□□□ -1.43
LMNB1-208ENST00000504788 C16orf71Q8IYS4 520 aaPredicted RBP6.12□□□□□ -1.43
LMNB1-208ENST00000504788 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
LMNB1-208ENST00000504788 LPIN2Q92539 896 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 GCC1Q96CN9 775 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 KIF1BPQ96EK5 621 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 TAOK3Q9H2K8 898 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 IL1RAPL2Q9NP60 686 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 ZNF277Q9NRM2 450 aaPredicted RBP6.12□□□□□ -1.43
LMNB1-208ENST00000504788 MYH7P12883 1935 aa6.12□□□□□ -1.43
LMNB1-208ENST00000504788 WDR90Q96KV7 1748 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 SMARCA5O60264 1052 aaPredicted RBP6.11□□□□□ -1.43
LMNB1-208ENST00000504788 UFL1O94874 794 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 IARSP41252 1262 aaKnown RBP6.11□□□□□ -1.43
LMNB1-208ENST00000504788 PHKA1P46020 1223 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 GYG1P46976 350 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 ATP2B3Q16720 1220 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 AOC3Q16853 763 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 METTL24Q5JXM2 366 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 XAGE2Q96GT9 111 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 ZNF512BQ96KM6 892 aaPredicted RBP6.11□□□□□ -1.43
LMNB1-208ENST00000504788 DBNDD2Q9BQY9 259 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 GGA1Q9UJY5 639 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 CDK5RAP2Q96SN8 1893 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 LMNB1P20700 586 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 ARID4AP29374 1257 aaPredicted RBP6.11□□□□□ -1.43
LMNB1-208ENST00000504788 BCAMP50895 628 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 G3BP1Q13283 466 aaKnown RBP eCLIP6.11□□□□□ -1.433e-6■■■■□ 20.2
LMNB1-208ENST00000504788 WASHC4Q2M389 1173 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 HSP90AB4PQ58FF6 505 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 CCDC102BQ68D86 513 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 SKAP1Q86WV1 359 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 PI4K2BQ8TCG2 481 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 ZNF384Q8TF68 577 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 GMLQ99445 158 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 LRRCC1Q9C099 1032 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 RWDD1Q9H446 243 aaPredicted RBP6.11□□□□□ -1.43
LMNB1-208ENST00000504788 CD209Q9NNX6 404 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 ANKIB1Q9P2G1 1089 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 CEP126Q9P2H0 1117 aa6.11□□□□□ -1.43
LMNB1-208ENST00000504788 MAST2Q6P0Q8 1798 aa6.1□□□□□ -1.43
LMNB1-208ENST00000504788 ECM29Q5VYK3 1845 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms