RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 DDX3YO15523 660 aaKnown RBP5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 C21orf2O43822 256 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 SMNDC1O75940 238 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 LCNL1Q6ZST4 164 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 TTLL10Q6ZVT0 673 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 DEPDC4Q8N2C3 294 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 TSEN2Q8NCE0 465 aaKnown RBP5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 BCANQ96GW7 911 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 TBC1D32Q96NH3 1257 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 SEC31BQ9NQW1 1179 aa5.2□□□□□ -1.58
HMGB3P17-201ENST00000504195 FAM95CA0A1B0GW59 222 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 LRRC10BA6NIK2 292 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 XYLBO75191 536 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 RASA1P20936 1047 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 CLDN10P78369 228 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 CEP135Q66GS9 1140 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 OGFOD1Q8N543 542 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 SCG3Q8WXD2 468 aaKnown RBP5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 SPACA7Q96KW9 195 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 PPP1R16BQ96T49 567 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 ADAM19Q9H013 955 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 RC3H2Q9HBD1 1191 aaKnown RBP5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 LRRC4CQ9HCJ2 640 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 KIAA1024Q9UPX6 916 aa5.19□□□□□ -1.58
HMGB3P17-201ENST00000504195 MMP20O60882 483 aa5.18□□□□□ -1.58
HMGB3P17-201ENST00000504195 ADAM11O75078 769 aa5.18□□□□□ -1.58
HMGB3P17-201ENST00000504195 EGFRP00533 1210 aa5.18□□□□□ -1.58
HMGB3P17-201ENST00000504195 ANKLE2Q86XL3 938 aa5.18□□□□□ -1.58
HMGB3P17-201ENST00000504195 STK11IPQ8N1F8 1099 aa5.18□□□□□ -1.58
HMGB3P17-201ENST00000504195 USP17L3A6NCW0 530 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 USP17L4A6NCW7 530 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 HOXD8P13378 290 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 CTSWP56202 376 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 MESP2Q0VG99 397 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 DUSP27Q5VZP5 1158 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 USP17L2Q6R6M4 530 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 USP17L1Q7RTZ2 530 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 KLK14Q9P0G3 267 aa5.17□□□□□ -1.58
HMGB3P17-201ENST00000504195 MICAL2O94851 1124 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 TSPAN15O95858 294 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 NLRP12P59046 1061 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 ECM1Q16610 540 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 ZNF574Q6ZN55 896 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 ZAR1Q86SH2 424 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 C1QL4Q86Z23 238 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 CILP2Q8IUL8 1156 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 CMTR1Q8N1G2 835 aaKnown RBP5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 KLHDC7BQ96G42 594 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 YIPF2Q9BWQ6 316 aa5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 ZC3H7BQ9UGR2 993 aaKnown RBP5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 MKRN1Q9UHC7 482 aaKnown RBP5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 RTCBQ9Y3I0 505 aaKnown RBP5.16□□□□□ -1.58
HMGB3P17-201ENST00000504195 USP11P51784 963 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 SEC13P55735 322 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 CABP4P57796 275 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 CYP27A1Q02318 531 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 DGKZQ13574 1117 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 C12orf50Q8NA57 414 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 GLIS3Q8NEA6 775 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 BCL7CQ8WUZ0 217 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 FAM53CQ9NYF3 392 aa5.15□□□□□ -1.59
HMGB3P17-201ENST00000504195 TM4SF5O14894 197 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 ATP9BO43861 1147 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 INHBBP09529 407 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 EPHA1P21709 976 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 IGFBP4P22692 258 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 ATP11AP98196 1134 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 NUTM2GQ5VZR2 741 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 RGL4Q8IZJ4 473 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 SHISA5Q8N114 240 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 USP20Q9Y2K6 914 aa5.14□□□□□ -1.59
HMGB3P17-201ENST00000504195 FAM170BA6NMN3 283 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 DKK1O94907 266 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 PTPRAP18433 802 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 PIP4K2BP78356 416 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 MLANAQ16655 118 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 C11orf91Q3C1V1 193 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 CRTC2Q53ET0 693 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 DBX2Q6ZNG2 339 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 WNT8BQ93098 351 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 CYP4F12Q9HCS2 524 aa5.13□□□□□ -1.59
HMGB3P17-201ENST00000504195 H3BRJ5 948 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 ADMP35318 185 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 HYAL2Q12891 473 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 FBLIM1Q8WUP2 373 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 MISP3Q96FF7 219 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 ZNF594Q96JF6 807 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 OSGEPQ9NPF4 335 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 PRKAG2Q9UGJ0 569 aa5.12□□□□□ -1.59
HMGB3P17-201ENST00000504195 MEGF11A6BM72 1044 aa5.11□□□□□ -1.59
HMGB3P17-201ENST00000504195 ARL4DP49703 201 aa5.11□□□□□ -1.59
HMGB3P17-201ENST00000504195 MYO19Q96H55 970 aa5.11□□□□□ -1.59
HMGB3P17-201ENST00000504195 HINFPQ9BQA5 517 aa5.11□□□□□ -1.59
HMGB3P17-201ENST00000504195 SH2B1Q9NRF2 756 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P17-201ENST00000504195 COG6Q9Y2V7 657 aa5.11□□□□□ -1.59
HMGB3P17-201ENST00000504195 PSPNO60542 156 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 RNASE1P07998 156 aaKnown RBP5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 FUT4P22083 530 aa5.1□□□□□ -1.59
HMGB3P17-201ENST00000504195 MCM6Q14566 821 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms