RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 XDHP47989 1333 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 SGSM2O43147 1006 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 TAF5LO75529 589 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 SRGNP10124 158 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 ATP2B4P23634 1241 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 ADORA1P30542 326 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 STYK1Q6J9G0 422 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 TMED8Q6PL24 325 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 C15orf52Q6ZUT6 534 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 VPS37DQ86XT2 251 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 ZNF804BA4D1E1 1349 aa9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 PDS5AQ29RF7 1337 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-202ENST00000503338 TNRC6CQ9HCJ0 1690 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 H0YIN7 160 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 GOLIM4O00461 696 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 FKBP4Q02790 459 aaKnown RBP eCLIP9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 MSL1Q68DK7 614 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 SP8Q8IXZ3 490 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 USP26Q9BXU7 913 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 SNRKQ9NRH2 765 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 HELLSQ9NRZ9 838 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 PODXL2Q9NZ53 605 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 DENND2AQ9ULE3 1009 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 ARAP2Q8WZ64 1704 aa9.81□□□□□ -0.84
TOPBP1-202ENST00000503338 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 POLD1P28340 1107 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 MCAMP43121 646 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 PHKA1P46020 1223 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 ANAPC15P60006 121 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 GRIPAP1Q4V328 841 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 CWC27Q6UX04 472 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 SPATA5Q8NB90 893 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 ANO2Q9NQ90 1003 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 GGA1Q9UJY5 639 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 ATP6V0A2Q9Y487 856 aa9.8□□□□□ -0.84
TOPBP1-202ENST00000503338 RNF113AO15541 343 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 HOXD11P31277 338 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 HIBADHP31937 336 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 ZAP70P43403 619 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 MAP3K12Q12852 859 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 BECN1Q14457 450 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 MCMDC2Q4G0Z9 681 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 CC2D2BQ6DHV5 1058 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 ZNF804AQ7Z570 1209 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 FBXO33Q7Z6M2 555 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 IPO9Q96P70 1041 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 MTFR1LQ9H019 292 aa9.79□□□□□ -0.84
TOPBP1-202ENST00000503338 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 FRAT2O75474 233 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 BCAMP50895 628 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 NMIQ13287 307 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 UBE3CQ15386 1083 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 ZMYM1Q5SVZ6 1142 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 ZGPATQ8N5A5 531 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 FAM84BQ96KN1 310 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 HMG20BQ9P0W2 317 aa9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 NSFL1CQ9UNZ2 370 aaKnown RBP9.78□□□□□ -0.84
TOPBP1-202ENST00000503338 MED23Q9ULK4 1368 aa9.77□□□□□ -0.84
TOPBP1-202ENST00000503338 C10orf71Q711Q0 1435 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 UFL1O94874 794 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 CYP2E1P05181 493 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 SCARF1Q14162 830 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 RABEP1Q15276 862 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 SPTY2D1Q68D10 685 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 APPBP2Q92624 585 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 ZNF622Q969S3 477 aaKnown RBP eCLIP9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 IL17RAQ96F46 866 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 EDC3Q96F86 508 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 EYA3Q99504 573 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 CCDC171Q6TFL3 1326 aa9.77□□□□□ -0.85
TOPBP1-202ENST00000503338 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 SNAP23O00161 211 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 ZKSCAN1P17029 563 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 HSPA4P34932 840 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 ADD2P35612 726 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 GYG1P46976 350 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 TGFB2P61812 414 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 GPSM2P81274 684 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 MPNDQ8N594 471 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 WDR66Q8TBY9 1149 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 FAM227BQ96M60 508 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 DSCC1Q9BVC3 393 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 U3KPZ7 1027 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-202ENST00000503338 ANKRD31Q8N7Z5 1873 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms