RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ACPPP15309 386 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 EIF4A3P38919 411 aaKnown RBP7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 GMCL1Q96IK5 515 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 SPACA7Q96KW9 195 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 CEP44Q9C0F1 390 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 DZANK1Q9NVP4 752 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 ADAMTS1Q9UHI8 967 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 HCN2Q9UL51 889 aa7.99□□□□□ -1.13
HMGB1P3-201ENST00000502802 F6X3S4 739 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 NRG2O14511 850 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 CD33P20138 364 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 NRLP54845 237 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 GIMAP6Q6P9H5 292 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 TPTE2Q6XPS3 522 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 CCDC155Q8N6L0 562 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 ABHD17AQ96GS6 310 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 SEC16BQ96JE7 1060 aa7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 ATXN7L1Q9ULK2 861 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P3-201ENST00000502802 TRPA1O75762 1119 aa7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 ITPKAP23677 461 aa7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 GRIA4P48058 902 aa7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 NEUROD1Q13562 356 aa7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 MAP3K11Q16584 847 aa7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 RAB44Q7Z6P3 723 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 TMEM102Q8N9M5 508 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 NSUN5Q96P11 429 aaKnown RBP7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 BHLHE41Q9C0J9 482 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P3-201ENST00000502802 NFKBIEO00221 500 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 GFRA3O60609 400 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 HSP90B1P14625 803 aaKnown RBP7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 LIG3P49916 1009 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 FAM182BQ5T319 152 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 PHC3Q8NDX5 983 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 NXPE3Q969Y0 559 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 EAF1Q96JC9 268 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 RHOVQ96L33 236 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 AAASQ9NRG9 546 aa7.96□□□□□ -1.14
HMGB1P3-201ENST00000502802 A0A096LPE4 126 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 LOC102724428A0A0B4J2F2 783 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 A0A1W2PPZ6 126 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 SSBP05455 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 CELA3AP09093 270 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 SIK1P57059 783 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 SPRED3Q2MJR0 410 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 FBXL19Q6PCT2 694 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 TRPM4Q8TD43 1214 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 NT5C1AQ9BXI3 368 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 PHF24Q9UPV7 400 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 TLR6Q9Y2C9 796 aa7.95□□□□□ -1.14
HMGB1P3-201ENST00000502802 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 ZBTB42B2RXF5 422 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 PF4P02776 101 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 FGFR3P22607 806 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 GPLD1P80108 840 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 RPS26P11Q5JNZ5 115 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 ASAP3Q8TDY4 903 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 GTPBP3Q969Y2 492 aaKnown RBP7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 NECAB3Q96P71 396 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 HHIPQ96QV1 700 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 SEC31BQ9NQW1 1179 aa7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 SUPT16HQ9Y5B9 1047 aaKnown RBP7.94□□□□□ -1.14
HMGB1P3-201ENST00000502802 J3QW42 95 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 PDE2AO00408 941 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 ENC1O14682 589 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 ST8SIA5O15466 376 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 GREM1O60565 184 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 ITGA6P23229 1130 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 NASPP49321 788 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 LMNB2Q03252 620 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 CAMK2GQ13555 558 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 COL9A2Q14055 689 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 PCSK7Q16549 785 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 CKAP2LQ8IYA6 745 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 KIFC2Q96AC6 838 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 OSBPL2Q9H1P3 480 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 ZNF576Q9H609 170 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 ZSWIM4Q9H7M6 989 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 DACH1Q9UI36 760 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 EFR3BQ9Y2G0 817 aa7.93□□□□□ -1.14
HMGB1P3-201ENST00000502802 GHRHP01286 108 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 GARTP22102 1010 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 MLLT1Q03111 559 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 FAM160A1Q05DH4 1040 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 NFX1Q12986 1120 aaKnown RBP7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 SNAP47Q5SQN1 464 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 TTBK2Q6IQ55 1244 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 AGMOQ6ZNB7 445 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 HFE2Q6ZVN8 426 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 RBSNQ9H1K0 784 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 GINM1Q9NU53 330 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 STRIP2Q9ULQ0 834 aa7.92□□□□□ -1.14
HMGB1P3-201ENST00000502802 TMA7Q9Y2S6 64 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms