RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 COA1Q9GZY4 146 aa19.3■□□□□ 0.68
CPNE1-228ENST00000498814 NOP58Q9Y2X3 529 aaKnown RBP19.3■□□□□ 0.68
CPNE1-228ENST00000498814 WDR90Q96KV7 1748 aa19.3■□□□□ 0.68
CPNE1-228ENST00000498814 HMMRO75330 724 aa19.29■□□□□ 0.68
CPNE1-228ENST00000498814 DDNO94850 711 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-228ENST00000498814 FGFR2P21802 821 aa19.29■□□□□ 0.68
CPNE1-228ENST00000498814 CXCL9Q07325 125 aa19.29■□□□□ 0.68
CPNE1-228ENST00000498814 PODNQ7Z5L7 613 aa19.29■□□□□ 0.68
CPNE1-228ENST00000498814 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
CPNE1-228ENST00000498814 GPC2Q8N158 579 aa19.29■□□□□ 0.68
CPNE1-228ENST00000498814 SURF6O75683 361 aaKnown RBP19.28■□□□□ 0.68
CPNE1-228ENST00000498814 TNIP1Q15025 636 aa19.28■□□□□ 0.68
CPNE1-228ENST00000498814 CIAPIN1Q6FI81 312 aa19.28■□□□□ 0.68
CPNE1-228ENST00000498814 ZNF526Q8TF50 670 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-228ENST00000498814 GPBP1L1Q9HC44 474 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-228ENST00000498814 SCN4AP35499 1836 aa19.28■□□□□ 0.68
CPNE1-228ENST00000498814 RAD17O75943 681 aa19.27■□□□□ 0.68
CPNE1-228ENST00000498814 AAMPQ13685 434 aa19.27■□□□□ 0.68
CPNE1-228ENST00000498814 ZNF804AQ7Z570 1209 aa19.27■□□□□ 0.68
CPNE1-228ENST00000498814 LPIN2Q92539 896 aa19.27■□□□□ 0.68
CPNE1-228ENST00000498814 ARAP2Q8WZ64 1704 aa19.26■□□□□ 0.67
CPNE1-228ENST00000498814 ZNF646O15015 1829 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-228ENST00000498814 IFIT1P09914 478 aaKnown RBP19.26■□□□□ 0.67
CPNE1-228ENST00000498814 TFCP2Q12800 502 aa19.26■□□□□ 0.67
CPNE1-228ENST00000498814 ATP2B3Q16720 1220 aa19.26■□□□□ 0.67
CPNE1-228ENST00000498814 L3MBTL3Q96JM7 780 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-228ENST00000498814 FAM84BQ96KN1 310 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-228ENST00000498814 CD209Q9NNX6 404 aa19.26■□□□□ 0.67
CPNE1-228ENST00000498814 KCNQ5Q9NR82 932 aa19.26■□□□□ 0.67
CPNE1-228ENST00000498814 GJA3Q9Y6H8 435 aa19.26■□□□□ 0.67
CPNE1-228ENST00000498814 SASH1O94885 1247 aa19.25■□□□□ 0.67
CPNE1-228ENST00000498814 SLC5A1P13866 664 aa19.25■□□□□ 0.67
CPNE1-228ENST00000498814 IL1R1P14778 569 aa19.25■□□□□ 0.67
CPNE1-228ENST00000498814 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-228ENST00000498814 AKAP2Q9Y2D5 859 aa19.25■□□□□ 0.67
CPNE1-228ENST00000498814 PSMD14O00487 310 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 HIBADHP31937 336 aaKnown RBP19.24■□□□□ 0.67
CPNE1-228ENST00000498814 GYG1P46976 350 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 HSP90AB4PQ58FF6 505 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 CAVIN4Q5BKX8 364 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 FBXO33Q7Z6M2 555 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 RRAGCQ9HB90 399 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 NMRK2Q9NPI5 230 aa19.24■□□□□ 0.67
CPNE1-228ENST00000498814 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 POTECB2RU33 542 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 VIL1P09327 827 aaKnown RBP19.23■□□□□ 0.67
CPNE1-228ENST00000498814 VEGFAP15692 232 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-228ENST00000498814 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 GPR108Q9NPR9 543 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 PCDHB15Q9Y5E8 787 aa19.23■□□□□ 0.67
CPNE1-228ENST00000498814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-228ENST00000498814 MYH13Q9UKX3 1938 aa19.22■□□□□ 0.67
CPNE1-228ENST00000498814 STRIP1Q5VSL9 837 aa19.22■□□□□ 0.67
CPNE1-228ENST00000498814 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
CPNE1-228ENST00000498814 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
CPNE1-228ENST00000498814 ZNF609O15014 1411 aa19.22■□□□□ 0.67
CPNE1-228ENST00000498814 A0A1B0GUL7 405 aa19.21■□□□□ 0.67
CPNE1-228ENST00000498814 IQCA1LA6NCM1 817 aa19.21■□□□□ 0.67
CPNE1-228ENST00000498814 RPS12P25398 132 aaKnown RBP19.21■□□□□ 0.67
CPNE1-228ENST00000498814 BCAMP50895 628 aa19.21■□□□□ 0.67
CPNE1-228ENST00000498814 VPS37DQ86XT2 251 aa19.21■□□□□ 0.67
CPNE1-228ENST00000498814 EXOC6Q8TAG9 804 aa19.21■□□□□ 0.67
CPNE1-228ENST00000498814 GMPSP49915 693 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-228ENST00000498814 SCNN1DP51172 638 aa19.2■□□□□ 0.66
CPNE1-228ENST00000498814 TIMM10P62072 90 aa19.2■□□□□ 0.66
CPNE1-228ENST00000498814 DACT2Q5SW24 774 aa19.2■□□□□ 0.66
CPNE1-228ENST00000498814 TTLL5Q6EMB2 1281 aa19.2■□□□□ 0.66
CPNE1-228ENST00000498814 RSBN1LQ6PCB5 846 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-228ENST00000498814 DPF2Q92785 391 aa19.2■□□□□ 0.66
CPNE1-228ENST00000498814 HACL1Q9UJ83 578 aa19.2■□□□□ 0.66
CPNE1-228ENST00000498814 KIF3CO14782 793 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 RAB11FIP3O75154 756 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-228ENST00000498814 GTF2IP78347 998 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 TNNI3KQ59H18 835 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 AGBL3Q8NEM8 1001 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 XAGE2Q96GT9 111 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 GPRC5DQ9NZD1 345 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 ZBTB12Q9Y330 459 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-228ENST00000498814 FPGT-TNNI3KV9GXZ4 949 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 FAM205AQ6ZU69 1335 aa19.19■□□□□ 0.66
CPNE1-228ENST00000498814 ZBTB22O15209 634 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 ADORA1P30542 326 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 KIF1BPQ96EK5 621 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 NEUROD6Q96NK8 337 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 MYO3BQ8WXR4 1341 aa19.18■□□□□ 0.66
CPNE1-228ENST00000498814 FBXW7Q969H0 707 aa19.17■□□□□ 0.66
CPNE1-228ENST00000498814 GMLQ99445 158 aa19.17■□□□□ 0.66
CPNE1-228ENST00000498814 TAF1DQ9H5J8 278 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-228ENST00000498814 GNL3LQ9NVN8 582 aaKnown RBP19.17■□□□□ 0.66
CPNE1-228ENST00000498814 CNOT7Q9UIV1 285 aaKnown RBP19.17■□□□□ 0.66
CPNE1-228ENST00000498814 EPHX2P34913 555 aa19.16■□□□□ 0.66
CPNE1-228ENST00000498814 EPS15P42566 896 aa19.16■□□□□ 0.66
CPNE1-228ENST00000498814 FKBP1AP62942 108 aaKnown RBP19.16■□□□□ 0.66
CPNE1-228ENST00000498814 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-228ENST00000498814 CCDC102BQ68D86 513 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms