RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SHPRHQ149N8 1683 aa6.75□□□□□ -1.33
SOX2-OT-218ENST00000498731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 ZBTB7BO15156 539 aaPredicted RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 UVSSAQ2YD98 709 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 FAXDC2Q96IV6 333 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 PICK1Q9NRD5 415 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 OVOS2A0A0J9YW53 1432 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 OVOS2Q6IE36 1432 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 PTCD1O75127 700 aaKnown RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 SKAP2O75563 359 aaPredicted RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 PHF14O94880 888 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 ZNF853P0CG23 659 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 TSHZ3Q63HK5 1081 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 DRC7Q8IY82 874 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 IGSF1Q8N6C5 1336 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 RBM47A0AV96 593 aaKnown RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 MX1P20591 662 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 RABEP1Q15276 862 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 ZNF772Q68DY9 489 aaPredicted RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 WWC2Q6AWC2 1192 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 FAM173BQ6P4H8 233 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 ARHGEF25Q86VW2 580 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 TTC5Q8N0Z6 440 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 CLIC6Q96NY7 704 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 BTG4Q9NY30 223 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 CHPF2Q9P2E5 772 aa6.74□□□□□ -1.33
SOX2-OT-218ENST00000498731 PRAMEF22A3QJZ6 481 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 MAP2K2P36507 400 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 NEK4P51957 841 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RHBDL3P58872 404 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 ATP2B2Q01814 1243 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 FAM98CQ17RN3 349 aaKnown RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 CCDC183Q5T5S1 534 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RINLQ6ZS11 566 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RPAINQ86UA6 219 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 TXLNBQ8N3L3 684 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 SREK1Q8WXA9 508 aaKnown RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 UPF3BQ9BZI7 483 aaKnown RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 MED4Q9NPJ6 270 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 C9orf78Q9NZ63 289 aaPredicted RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 PTCH1Q13635 1447 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 ADGRL3Q9HAR2 1447 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 MAGEA9P43362 315 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 PTPN21Q16825 1174 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 HSP90AB3PQ58FF7 597 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 PIK3R4Q99570 1358 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 MTA3Q9BTC8 594 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RABEP2Q9H5N1 569 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 IL1RAPL2Q9NP60 686 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 USP16Q9Y5T5 823 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RGPD8O14715 1765 aaPredicted RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 MAP3K5Q99683 1374 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RPAP1Q9BWH6 1393 aaPredicted RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 FRMD3A2A2Y4 597 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 SMC1AQ14683 1233 aaKnown RBP6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 LRCH2Q5VUJ6 765 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 RILPL2Q969X0 211 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 ERO1AQ96HE7 468 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 PAXBP1Q9Y5B6 917 aa6.73□□□□□ -1.33
SOX2-OT-218ENST00000498731 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 RAD50Q92878 1312 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 PI4KAP2A4QPH2 592 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 GOLGA6L6A8MZA4 724 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 SLU7O95391 586 aaKnown RBP6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 UBTFL1P0CB47 393 aaPredicted RBP6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 CABP4P57796 275 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 MCTP2Q6DN12 878 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 PI4KAP1Q8N8J0 262 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 ARHGEF10O15013 1369 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 HMMRO75330 724 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 DPH6Q7L8W6 267 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 RIC3Q7Z5B4 369 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 THOC1Q96FV9 657 aaKnown RBP6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 CBX8Q9HC52 389 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 C1orf167Q5SNV9 1468 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 ITSN1Q15811 1721 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 USP31Q70CQ4 1352 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 ROBO1Q9Y6N7 1651 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 TCF3P15923 654 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 LIG1P18858 919 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 FAM184AQ8NB25 1140 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 IL25Q9H293 177 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 DEF6Q9H4E7 631 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 RAI14Q9P0K7 980 aa6.72□□□□□ -1.33
SOX2-OT-218ENST00000498731 RNMTO43148 476 aaKnown RBP6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 CDC45O75419 566 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 SURF6O75683 361 aaKnown RBP6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 GNAI2P04899 355 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 ZNF75DP51815 510 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 CCZ1BP86790 482 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 CCZ1P86791 482 aaPredicted RBP6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 PTPN14Q15678 1187 aa6.71□□□□□ -1.33
SOX2-OT-218ENST00000498731 NBPF20Q3BBV1 942 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms