RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CHRNDQ07001 517 aa24.81■■□□□ 1.56
CTSD-206ENST00000497544 OS9Q13438 667 aaPredicted RBP24.81■■□□□ 1.56
CTSD-206ENST00000497544 MROH5Q6ZUA9 1318 aa24.81■■□□□ 1.56
CTSD-206ENST00000497544 IL15P40933 162 aaPredicted RBP24.8■■□□□ 1.56
CTSD-206ENST00000497544 GPSM2P81274 684 aa24.8■■□□□ 1.56
CTSD-206ENST00000497544 METTL24Q5JXM2 366 aa24.8■■□□□ 1.56
CTSD-206ENST00000497544 DPP8Q6V1X1 898 aaPredicted RBP24.8■■□□□ 1.56
CTSD-206ENST00000497544 HSP90AB4PQ58FF6 505 aa24.79■■□□□ 1.56
CTSD-206ENST00000497544 SLC51AQ86UW1 340 aa24.79■■□□□ 1.56
CTSD-206ENST00000497544 HELBQ8NG08 1087 aaPredicted RBP24.79■■□□□ 1.56
CTSD-206ENST00000497544 CEP126Q9P2H0 1117 aa24.79■■□□□ 1.56
CTSD-206ENST00000497544 NOP58Q9Y2X3 529 aaKnown RBP24.79■■□□□ 1.56
CTSD-206ENST00000497544 XDHP47989 1333 aa24.79■■□□□ 1.56
CTSD-206ENST00000497544 LTBP1Q14766 1721 aa24.78■■□□□ 1.56
CTSD-206ENST00000497544 ATG9AQ7Z3C6 839 aa24.78■■□□□ 1.56
CTSD-206ENST00000497544 RWDD1Q9H446 243 aaPredicted RBP24.78■■□□□ 1.56
CTSD-206ENST00000497544 ATP2B4P23634 1241 aa24.77■■□□□ 1.56
CTSD-206ENST00000497544 SUPT20HQ8NEM7 779 aa24.77■■□□□ 1.56
CTSD-206ENST00000497544 MCOLN1Q9GZU1 580 aa24.77■■□□□ 1.56
CTSD-206ENST00000497544 TAF1DQ9H5J8 278 aaPredicted RBP24.77■■□□□ 1.56
CTSD-206ENST00000497544 PODXL2Q9NZ53 605 aa24.77■■□□□ 1.56
CTSD-206ENST00000497544 GGA1Q9UJY5 639 aa24.77■■□□□ 1.56
CTSD-206ENST00000497544 C6orf229H3BNL8 230 aa24.76■■□□□ 1.55
CTSD-206ENST00000497544 TAF5LO75529 589 aa24.76■■□□□ 1.55
CTSD-206ENST00000497544 KCNJ4P48050 445 aa24.76■■□□□ 1.55
CTSD-206ENST00000497544 EXOC6BQ9Y2D4 811 aa24.76■■□□□ 1.55
CTSD-206ENST00000497544 LEMD3Q9Y2U8 911 aa24.76■■□□□ 1.55
CTSD-206ENST00000497544 CASP8AP2Q9UKL3 1982 aa24.76■■□□□ 1.55
CTSD-206ENST00000497544 IQCA1LA6NCM1 817 aa24.75■■□□□ 1.55
CTSD-206ENST00000497544 FKBP4Q02790 459 aaKnown RBP eCLIP24.75■■□□□ 1.55
CTSD-206ENST00000497544 HDAC1Q13547 482 aaPredicted RBP24.75■■□□□ 1.55
CTSD-206ENST00000497544 ERC1Q8IUD2 1116 aa24.75■■□□□ 1.55
CTSD-206ENST00000497544 LRRC37AA6NMS7 1700 aa24.75■■□□□ 1.55
CTSD-206ENST00000497544 UFL1O94874 794 aa24.74■■□□□ 1.55
CTSD-206ENST00000497544 PDE8BO95263 885 aa24.74■■□□□ 1.55
CTSD-206ENST00000497544 PSMD1Q99460 953 aa24.74■■□□□ 1.55
CTSD-206ENST00000497544 TAOK3Q9H2K8 898 aa24.74■■□□□ 1.55
CTSD-206ENST00000497544 DCTPP1Q9H773 170 aa24.74■■□□□ 1.55
CTSD-206ENST00000497544 RAB11FIP3O75154 756 aa24.73■■□□□ 1.55
CTSD-206ENST00000497544 TBC1D16Q8TBP0 767 aa24.73■■□□□ 1.55
CTSD-206ENST00000497544 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
CTSD-206ENST00000497544 POLLQ9UGP5 575 aa24.73■■□□□ 1.55
CTSD-206ENST00000497544 TSKSQ9UJT2 592 aa24.73■■□□□ 1.55
CTSD-206ENST00000497544 ZNF804BA4D1E1 1349 aa24.72■■□□□ 1.55
CTSD-206ENST00000497544 SASH1O94885 1247 aa24.72■■□□□ 1.55
CTSD-206ENST00000497544 TFCP2Q12800 502 aa24.72■■□□□ 1.55
CTSD-206ENST00000497544 ERICH6BQ5W0A0 696 aa24.72■■□□□ 1.55
CTSD-206ENST00000497544 EYA3Q99504 573 aa24.72■■□□□ 1.55
CTSD-206ENST00000497544 RTFDC1Q9BY42 306 aaPredicted RBP24.72■■□□□ 1.55
CTSD-206ENST00000497544 LTBP3Q9NS15 1303 aa24.71■■□□□ 1.55
CTSD-206ENST00000497544 APBB1O00213 710 aa24.71■■□□□ 1.55
CTSD-206ENST00000497544 UBE4AQ14139 1066 aa24.71■■□□□ 1.55
CTSD-206ENST00000497544 EAPPQ56P03 285 aaPredicted RBP24.71■■□□□ 1.55
CTSD-206ENST00000497544 VGLL2Q8N8G2 317 aa24.71■■□□□ 1.55
CTSD-206ENST00000497544 BEGAINQ9BUH8 593 aa24.71■■□□□ 1.55
CTSD-206ENST00000497544 ABT1Q9ULW3 272 aaKnown RBP24.71■■□□□ 1.55
CTSD-206ENST00000497544 AKAP2Q9Y2D5 859 aa24.71■■□□□ 1.55
CTSD-206ENST00000497544 WASHC4Q2M389 1173 aa24.7■■□□□ 1.54
CTSD-206ENST00000497544 KIF1BPQ96EK5 621 aa24.7■■□□□ 1.54
CTSD-206ENST00000497544 ZC3H12CQ9C0D7 883 aaKnown RBP24.7■■□□□ 1.54
CTSD-206ENST00000497544 VPS33BQ9H267 617 aa24.7■■□□□ 1.54
CTSD-206ENST00000497544 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
CTSD-206ENST00000497544 WTIPA6NIX2 430 aaPredicted RBP24.69■■□□□ 1.54
CTSD-206ENST00000497544 SNAP23O00161 211 aa24.69■■□□□ 1.54
CTSD-206ENST00000497544 RIMBP2O15034 1052 aa24.69■■□□□ 1.54
CTSD-206ENST00000497544 IGHDP01880 384 aa24.69■■□□□ 1.54
CTSD-206ENST00000497544 IFIT1P09914 478 aaKnown RBP24.69■■□□□ 1.54
CTSD-206ENST00000497544 PUM3Q15397 648 aaKnown RBP24.69■■□□□ 1.54
CTSD-206ENST00000497544 RHPN1Q8TCX5 695 aa24.69■■□□□ 1.54
CTSD-206ENST00000497544 GCC1Q96CN9 775 aa24.69■■□□□ 1.54
CTSD-206ENST00000497544 ZNF277Q9NRM2 450 aaPredicted RBP24.69■■□□□ 1.54
CTSD-206ENST00000497544 GPR101Q96P66 508 aaPredicted RBP24.68■■□□□ 1.54
CTSD-206ENST00000497544 CLEC11AQ9Y240 323 aa24.68■■□□□ 1.54
CTSD-206ENST00000497544 G3V3G9 751 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 PPIP5K2O43314 1243 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 SLC5A1P13866 664 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 IARSP41252 1262 aaKnown RBP24.67■■□□□ 1.54
CTSD-206ENST00000497544 ATP2B3Q16720 1220 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 DCAF8Q5TAQ9 597 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 LPIN2Q92539 896 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 CAPNS2Q96L46 248 aa24.67■■□□□ 1.54
CTSD-206ENST00000497544 ZBTB47Q9UFB7 747 aaPredicted RBP24.67■■□□□ 1.54
CTSD-206ENST00000497544 FGFR2P21802 821 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 AOC3Q16853 763 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 MAP1SQ66K74 1059 aaPredicted RBP24.66■■□□□ 1.54
CTSD-206ENST00000497544 CNTROBQ8N137 903 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 LARGE2Q8N3Y3 721 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 NEUROD6Q96NK8 337 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 LRRCC1Q9C099 1032 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 BCL11AQ9H165 835 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 GPR108Q9NPR9 543 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 A0A1B0GUL6 1792 aa24.66■■□□□ 1.54
CTSD-206ENST00000497544 TIMM10P62072 90 aa24.65■■□□□ 1.54
CTSD-206ENST00000497544 KIAA2012Q0VF49 1180 aa24.65■■□□□ 1.54
CTSD-206ENST00000497544 PRPF38BQ5VTL8 546 aaKnown RBP24.65■■□□□ 1.54
CTSD-206ENST00000497544 IL1RAPL2Q9NP60 686 aa24.65■■□□□ 1.54
CTSD-206ENST00000497544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.65■■□□□ 1.54
CTSD-206ENST00000497544 TNNI3KQ59H18 835 aa24.64■■□□□ 1.54
CTSD-206ENST00000497544 CLASRPQ8N2M8 674 aaKnown RBP24.64■■□□□ 1.54
CTSD-206ENST00000497544 CCDC136Q96JN2 1154 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms