RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 RGPD3A6NKT7 1758 aaPredicted RBP25.38■■□□□ 1.65
FGFR1-223ENST00000496296 RGPD4Q7Z3J3 1758 aa25.38■■□□□ 1.65
FGFR1-223ENST00000496296 ZNF827Q17R98 1081 aa25.38■■□□□ 1.65
FGFR1-223ENST00000496296 BSDC1Q9NW68 430 aaPredicted RBP25.38■■□□□ 1.65
FGFR1-223ENST00000496296 HELBQ8NG08 1087 aaPredicted RBP25.37■■□□□ 1.65
FGFR1-223ENST00000496296 EDC3Q96F86 508 aaKnown RBP25.37■■□□□ 1.65
FGFR1-223ENST00000496296 SNX14Q9Y5W7 946 aa25.37■■□□□ 1.65
FGFR1-223ENST00000496296 KBTBD3Q8NAB2 608 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 GOLIM4O00461 696 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 FGFR2P21802 821 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 TM4SF1P30408 202 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 ST5P78524 1137 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 CHRNDQ07001 517 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 DDX46Q7L014 1031 aaKnown RBP25.36■■□□□ 1.65
FGFR1-223ENST00000496296 ZNF512BQ96KM6 892 aaPredicted RBP25.36■■□□□ 1.65
FGFR1-223ENST00000496296 NDUFB9Q9Y6M9 179 aa25.36■■□□□ 1.65
FGFR1-223ENST00000496296 SERPINB2P05120 415 aa25.35■■□□□ 1.65
FGFR1-223ENST00000496296 NMIQ13287 307 aaPredicted RBP25.35■■□□□ 1.65
FGFR1-223ENST00000496296 CCDC24Q8N4L8 307 aa25.35■■□□□ 1.65
FGFR1-223ENST00000496296 TTC14Q96N46 770 aa25.35■■□□□ 1.65
FGFR1-223ENST00000496296 ZDHHC9Q9Y397 364 aa25.35■■□□□ 1.65
FGFR1-223ENST00000496296 LRRFIP1Q32MZ4 808 aaKnown RBP25.34■■□□□ 1.65
FGFR1-223ENST00000496296 SPEF2Q9C093 1822 aa25.34■■□□□ 1.65
FGFR1-223ENST00000496296 GOLGA6L3A6NEY3 463 aa25.34■■□□□ 1.65
FGFR1-223ENST00000496296 TAF5LO75529 589 aa25.34■■□□□ 1.65
FGFR1-223ENST00000496296 RPS8P62241 208 aaKnown RBP25.34■■□□□ 1.65
FGFR1-223ENST00000496296 FKBP4Q02790 459 aaKnown RBP eCLIP25.34■■□□□ 1.65
FGFR1-223ENST00000496296 PRR5LQ6MZQ0 368 aa25.34■■□□□ 1.65
FGFR1-223ENST00000496296 NLGN1Q8N2Q7 840 aa25.34■■□□□ 1.65
FGFR1-223ENST00000496296 CASZ1Q86V15 1759 aa25.33■■□□□ 1.65
FGFR1-223ENST00000496296 UQCRFS1P1P0C7P4 283 aa25.33■■□□□ 1.65
FGFR1-223ENST00000496296 FAM227BQ96M60 508 aa25.33■■□□□ 1.65
FGFR1-223ENST00000496296 TM6SF1Q9BZW5 370 aa25.33■■□□□ 1.65
FGFR1-223ENST00000496296 CELF1Q92879 486 aaKnown RBP25.32■■□□□ 1.64
FGFR1-223ENST00000496296 KLHL40Q2TBA0 621 aa25.32■■□□□ 1.64
FGFR1-223ENST00000496296 COL23A1Q86Y22 540 aaPredicted RBP25.32■■□□□ 1.64
FGFR1-223ENST00000496296 BRPF3Q9ULD4 1205 aa25.32■■□□□ 1.64
FGFR1-223ENST00000496296 PKP1Q13835 747 aa25.31■■□□□ 1.64
FGFR1-223ENST00000496296 CCDC102BQ68D86 513 aa25.31■■□□□ 1.64
FGFR1-223ENST00000496296 CCDC171Q6TFL3 1326 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 RASEFQ8IZ41 740 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 UPF3BQ9BZI7 483 aaKnown RBP25.3■■□□□ 1.64
FGFR1-223ENST00000496296 MED23Q9ULK4 1368 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 ARAP2Q8WZ64 1704 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 A0A0D9SFI3 127 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 PSDA5PKW4 1024 aaPredicted RBP25.3■■□□□ 1.64
FGFR1-223ENST00000496296 BRD1O95696 1058 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 MINPP1Q9UNW1 487 aa25.3■■□□□ 1.64
FGFR1-223ENST00000496296 POLRMTO00411 1230 aaKnown RBP25.29■■□□□ 1.64
FGFR1-223ENST00000496296 ARID4AP29374 1257 aaPredicted RBP25.29■■□□□ 1.64
FGFR1-223ENST00000496296 NECTIN1Q15223 517 aa25.29■■□□□ 1.64
FGFR1-223ENST00000496296 GZF1Q9H116 711 aaPredicted RBP25.29■■□□□ 1.64
FGFR1-223ENST00000496296 PTH1RQ03431 593 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 TTF1Q15361 905 aaPredicted RBP25.28■■□□□ 1.64
FGFR1-223ENST00000496296 ANKRD2Q9GZV1 360 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 ZAP70P43403 619 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 DDR1Q08345 913 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 UBE4AQ14139 1066 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 RPGRQ92834 1020 aaKnown RBP25.28■■□□□ 1.64
FGFR1-223ENST00000496296 MAP4K1Q92918 833 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 LMBRD1Q9NUN5 540 aa25.28■■□□□ 1.64
FGFR1-223ENST00000496296 TNRC6CQ9HCJ0 1690 aaKnown RBP25.27■■□□□ 1.64
FGFR1-223ENST00000496296 MCAMP43121 646 aa25.27■■□□□ 1.64
FGFR1-223ENST00000496296 PHKA1P46020 1223 aa25.27■■□□□ 1.64
FGFR1-223ENST00000496296 MRE11P49959 708 aa25.27■■□□□ 1.64
FGFR1-223ENST00000496296 SCARF1Q14162 830 aa25.27■■□□□ 1.64
FGFR1-223ENST00000496296 R3HDM1Q15032 1099 aaKnown RBP25.27■■□□□ 1.64
FGFR1-223ENST00000496296 MCMDC2Q4G0Z9 681 aa25.27■■□□□ 1.64
FGFR1-223ENST00000496296 COL4A1P02462 1669 aa25.26■■□□□ 1.63
FGFR1-223ENST00000496296 ZFYP08048 801 aaPredicted RBP25.26■■□□□ 1.63
FGFR1-223ENST00000496296 HELLSQ9NRZ9 838 aa25.26■■□□□ 1.63
FGFR1-223ENST00000496296 PNPLA7Q6ZV29 1317 aa25.26■■□□□ 1.63
FGFR1-223ENST00000496296 RNF113AO15541 343 aaKnown RBP25.26■■□□□ 1.63
FGFR1-223ENST00000496296 GRAPQ13588 217 aa25.26■■□□□ 1.63
FGFR1-223ENST00000496296 GRAPLQ8TC17 118 aaPredicted RBP25.26■■□□□ 1.63
FGFR1-223ENST00000496296 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.26■■□□□ 1.63
FGFR1-223ENST00000496296 ZSWIM6Q9HCJ5 1215 aa25.26■■□□□ 1.63
FGFR1-223ENST00000496296 XRCC6P12956 609 aaKnown RBP eCLIP25.25■■□□□ 1.63
FGFR1-223ENST00000496296 STK32BQ9NY57 414 aa25.25■■□□□ 1.63
FGFR1-223ENST00000496296 SNAP23O00161 211 aa25.24■■□□□ 1.63
FGFR1-223ENST00000496296 KCNJ4P48050 445 aa25.24■■□□□ 1.63
FGFR1-223ENST00000496296 VPS53Q5VIR6 699 aa25.24■■□□□ 1.63
FGFR1-223ENST00000496296 MCTP1Q6DN14 999 aa25.24■■□□□ 1.63
FGFR1-223ENST00000496296 LIMCH1Q9UPQ0 1083 aa25.24■■□□□ 1.63
FGFR1-223ENST00000496296 TAF1P21675 1872 aa25.24■■□□□ 1.63
FGFR1-223ENST00000496296 CRY2Q49AN0 593 aa25.23■■□□□ 1.63
FGFR1-223ENST00000496296 ZSCAN25Q6NSZ9 544 aa25.23■■□□□ 1.63
FGFR1-223ENST00000496296 RBM17Q96I25 401 aaKnown RBP25.23■■□□□ 1.63
FGFR1-223ENST00000496296 RPAP1Q9BWH6 1393 aaPredicted RBP25.23■■□□□ 1.63
FGFR1-223ENST00000496296 CAVIN4Q5BKX8 364 aa25.23■■□□□ 1.63
FGFR1-223ENST00000496296 PI16Q6UXB8 463 aa25.23■■□□□ 1.63
FGFR1-223ENST00000496296 ANO8Q9HCE9 1232 aaPredicted RBP25.23■■□□□ 1.63
FGFR1-223ENST00000496296 GNL3LQ9NVN8 582 aaKnown RBP25.23■■□□□ 1.63
FGFR1-223ENST00000496296 AK2P54819 239 aa25.22■■□□□ 1.63
FGFR1-223ENST00000496296 SLC15A2Q16348 729 aa25.22■■□□□ 1.63
FGFR1-223ENST00000496296 ZMYM1Q5SVZ6 1142 aa25.22■■□□□ 1.63
FGFR1-223ENST00000496296 SPATA5Q8NB90 893 aa25.22■■□□□ 1.63
FGFR1-223ENST00000496296 RBM8AQ9Y5S9 174 aaKnown RBP25.22■■□□□ 1.63
FGFR1-223ENST00000496296 BCAMP50895 628 aa25.21■■□□□ 1.63
FGFR1-223ENST00000496296 RUFY3Q7L099 469 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms