RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 GJA8P48165 433 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 GRAPQ13588 217 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-219ENST00000495172 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-219ENST00000495172 BDP1A6H8Y1 2624 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
GARNL3-219ENST00000495172 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
GARNL3-219ENST00000495172 USP17L8P0C7I0 530 aa12.06□□□□□ -0.48
GARNL3-219ENST00000495172 MYL6BP14649 208 aa12.06□□□□□ -0.48
GARNL3-219ENST00000495172 NF2P35240 595 aa12.06□□□□□ -0.48
GARNL3-219ENST00000495172 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
GARNL3-219ENST00000495172 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
GARNL3-219ENST00000495172 GMLQ99445 158 aa12.06□□□□□ -0.48
GARNL3-219ENST00000495172 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
GARNL3-219ENST00000495172 TNFRSF10AO00220 468 aa12.05□□□□□ -0.48
GARNL3-219ENST00000495172 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-219ENST00000495172 INHBEP58166 350 aa12.05□□□□□ -0.48
GARNL3-219ENST00000495172 DDX46Q7L014 1031 aaKnown RBP12.05□□□□□ -0.48
GARNL3-219ENST00000495172 MAFAQ8NHW3 353 aaPredicted RBP12.05□□□□□ -0.48
GARNL3-219ENST00000495172 SNX27Q96L92 541 aa12.05□□□□□ -0.48
GARNL3-219ENST00000495172 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
GARNL3-219ENST00000495172 ERVV-1B6SEH8 477 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 GJB1P08034 283 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 BMP8BP34820 402 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 TDHQ8IZJ6 230 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 TBC1D16Q8TBP0 767 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 DIS3LQ8TF46 1054 aaKnown RBP12.04□□□□□ -0.48
GARNL3-219ENST00000495172 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
GARNL3-219ENST00000495172 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 PSME4Q14997 1843 aa12.04□□□□□ -0.48
GARNL3-219ENST00000495172 WNT10BO00744 389 aa12.03□□□□□ -0.48
GARNL3-219ENST00000495172 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
GARNL3-219ENST00000495172 ZBTB48P10074 688 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-219ENST00000495172 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-219ENST00000495172 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
GARNL3-219ENST00000495172 KIF6Q6ZMV9 814 aa12.03□□□□□ -0.48
GARNL3-219ENST00000495172 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
GARNL3-219ENST00000495172 CEMIPQ8WUJ3 1361 aa12.03□□□□□ -0.48
GARNL3-219ENST00000495172 OTOFQ9HC10 1997 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 POTEB2H3BUK9 544 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 AGBL3Q8NEM8 1001 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 BRI3BPQ8WY22 251 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 CDX2Q99626 313 aaPredicted RBP12.02□□□□□ -0.49
GARNL3-219ENST00000495172 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
GARNL3-219ENST00000495172 PIEZO1Q92508 2521 aa12.02□□□□□ -0.49
GARNL3-219ENST00000495172 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
GARNL3-219ENST00000495172 DCTN1Q14203 1278 aa12.01□□□□□ -0.49
GARNL3-219ENST00000495172 CDCA8Q53HL2 280 aa12.01□□□□□ -0.49
GARNL3-219ENST00000495172 OTUD7BQ6GQQ9 843 aa12.01□□□□□ -0.49
GARNL3-219ENST00000495172 MCM10Q7L590 875 aa12.01□□□□□ -0.49
GARNL3-219ENST00000495172 MYLIPQ8WY64 445 aa12.01□□□□□ -0.49
GARNL3-219ENST00000495172 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
GARNL3-219ENST00000495172 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
GARNL3-219ENST00000495172 UBE2OQ9C0C9 1292 aaKnown RBP12.01□□□□□ -0.49
GARNL3-219ENST00000495172 BIN2Q9UBW5 565 aaPredicted RBP12.01□□□□□ -0.49
GARNL3-219ENST00000495172 G3V3G9 751 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 GRK4P32298 578 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 NKX2-3Q8TAU0 364 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
GARNL3-219ENST00000495172 ELP3Q9H9T3 547 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 RIPOR2Q9Y4F9 1068 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 DNAH12Q6ZR08 3092 aa12□□□□□ -0.49
GARNL3-219ENST00000495172 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-219ENST00000495172 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
GARNL3-219ENST00000495172 USP38Q8NB14 1042 aa11.99□□□□□ -0.49
GARNL3-219ENST00000495172 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
GARNL3-219ENST00000495172 TRIM47Q96LD4 638 aa11.99□□□□□ -0.49
GARNL3-219ENST00000495172 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
GARNL3-219ENST00000495172 UFL1O94874 794 aa11.98□□□□□ -0.49
GARNL3-219ENST00000495172 PODNQ7Z5L7 613 aa11.98□□□□□ -0.49
GARNL3-219ENST00000495172 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
GARNL3-219ENST00000495172 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
GARNL3-219ENST00000495172 EYA3Q99504 573 aa11.98□□□□□ -0.49
GARNL3-219ENST00000495172 PANK3Q9H999 370 aa11.98□□□□□ -0.49
GARNL3-219ENST00000495172 NCOR1O75376 2440 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 AOX1Q06278 1338 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 CCL15-CCL14A0A0B4J2E2 113 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 SGPL1O95470 568 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 TFRCP02786 760 aaKnown RBP11.97□□□□□ -0.49
GARNL3-219ENST00000495172 ANXA1P04083 346 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 OSBPP22059 807 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 ARHGEF6Q15052 776 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 CCL15Q16663 113 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 RAET1EQ8TD07 263 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 SYMPKQ92797 1274 aaKnown RBP11.97□□□□□ -0.49
GARNL3-219ENST00000495172 DEFB118Q96PH6 123 aa11.97□□□□□ -0.49
GARNL3-219ENST00000495172 USP17L3A6NCW0 530 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 USP17L4A6NCW7 530 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-219ENST00000495172 DSG3P32926 999 aa11.96□□□□□ -0.49
GARNL3-219ENST00000495172 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-219ENST00000495172 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms