RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SSH3Q8TE77 659 aa16.85■□□□□ 0.29
COL1A1-208ENST00000494334 GJA3Q9Y6H8 435 aa16.85■□□□□ 0.29
COL1A1-208ENST00000494334 KIF3CO14782 793 aa16.84■□□□□ 0.29
COL1A1-208ENST00000494334 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-208ENST00000494334 PODNQ7Z5L7 613 aa16.84■□□□□ 0.29
COL1A1-208ENST00000494334 L3MBTL3Q96JM7 780 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-208ENST00000494334 COA1Q9GZY4 146 aa16.84■□□□□ 0.29
COL1A1-208ENST00000494334 PSMD14O00487 310 aa16.82■□□□□ 0.28
COL1A1-208ENST00000494334 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-208ENST00000494334 FGFR2P21802 821 aa16.82■□□□□ 0.28
COL1A1-208ENST00000494334 TNIP1Q15025 636 aa16.82■□□□□ 0.28
COL1A1-208ENST00000494334 RPAP2Q8IXW5 612 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-208ENST00000494334 CEP126Q9P2H0 1117 aa16.82■□□□□ 0.28
COL1A1-208ENST00000494334 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL1A1-208ENST00000494334 PUM3Q15397 648 aaKnown RBP16.81■□□□□ 0.28
COL1A1-208ENST00000494334 FAM84BQ96KN1 310 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-208ENST00000494334 CD209Q9NNX6 404 aa16.81■□□□□ 0.28
COL1A1-208ENST00000494334 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
COL1A1-208ENST00000494334 WDR90Q96KV7 1748 aa16.8■□□□□ 0.28
COL1A1-208ENST00000494334 VIL1P09327 827 aaKnown RBP16.8■□□□□ 0.28
COL1A1-208ENST00000494334 GYG1P46976 350 aa16.8■□□□□ 0.28
COL1A1-208ENST00000494334 SCNN1DP51172 638 aa16.8■□□□□ 0.28
COL1A1-208ENST00000494334 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
COL1A1-208ENST00000494334 LPIN2Q92539 896 aa16.8■□□□□ 0.28
COL1A1-208ENST00000494334 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-208ENST00000494334 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 IQCA1LA6NCM1 817 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 SURF6O75683 361 aaKnown RBP16.79■□□□□ 0.28
COL1A1-208ENST00000494334 IFIT1P09914 478 aaKnown RBP16.79■□□□□ 0.28
COL1A1-208ENST00000494334 IL1R1P14778 569 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-208ENST00000494334 TFCP2Q12800 502 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 FBXO33Q7Z6M2 555 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 HACL1Q9UJ83 578 aa16.79■□□□□ 0.28
COL1A1-208ENST00000494334 NOP58Q9Y2X3 529 aaKnown RBP16.79■□□□□ 0.28
COL1A1-208ENST00000494334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-208ENST00000494334 USP17L3A6NCW0 530 aa16.78■□□□□ 0.28
COL1A1-208ENST00000494334 USP17L4A6NCW7 530 aa16.78■□□□□ 0.28
COL1A1-208ENST00000494334 SASH1O94885 1247 aa16.78■□□□□ 0.28
COL1A1-208ENST00000494334 SLC5A1P13866 664 aa16.78■□□□□ 0.28
COL1A1-208ENST00000494334 HIBADHP31937 336 aaKnown RBP16.78■□□□□ 0.28
COL1A1-208ENST00000494334 EPS15P42566 896 aa16.78■□□□□ 0.28
COL1A1-208ENST00000494334 USP17L1Q7RTZ2 530 aa16.78■□□□□ 0.28
COL1A1-208ENST00000494334 BCAMP50895 628 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 ATP2B3Q16720 1220 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 STRIP1Q5VSL9 837 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 TTLL5Q6EMB2 1281 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-208ENST00000494334 TDRD7Q8NHU6 1098 aaKnown RBP16.77■□□□□ 0.28
COL1A1-208ENST00000494334 DPF2Q92785 391 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 TAF1DQ9H5J8 278 aaPredicted RBP16.77■□□□□ 0.28
COL1A1-208ENST00000494334 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
COL1A1-208ENST00000494334 RPS12P25398 132 aaKnown RBP16.76■□□□□ 0.27
COL1A1-208ENST00000494334 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
COL1A1-208ENST00000494334 EPHX2P34913 555 aa16.76■□□□□ 0.27
COL1A1-208ENST00000494334 TIMM10P62072 90 aa16.76■□□□□ 0.27
COL1A1-208ENST00000494334 GTF2IP78347 998 aa16.76■□□□□ 0.27
COL1A1-208ENST00000494334 DACT2Q5SW24 774 aa16.76■□□□□ 0.27
COL1A1-208ENST00000494334 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
COL1A1-208ENST00000494334 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
COL1A1-208ENST00000494334 SCN9AQ15858 1988 aa16.76■□□□□ 0.27
COL1A1-208ENST00000494334 SHTN1A0MZ66 631 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 HMMRO75330 724 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 TOMM70O94826 608 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-208ENST00000494334 VPS37DQ86XT2 251 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-208ENST00000494334 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 FBXW7Q969H0 707 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 GMLQ99445 158 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 EXOC6BQ9Y2D4 811 aa16.75■□□□□ 0.27
COL1A1-208ENST00000494334 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
COL1A1-208ENST00000494334 POTEIP0CG38 1075 aa16.74■□□□□ 0.27
COL1A1-208ENST00000494334 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
COL1A1-208ENST00000494334 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
COL1A1-208ENST00000494334 ADORA1P30542 326 aa16.73■□□□□ 0.27
COL1A1-208ENST00000494334 PNMA8AQ86V59 439 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-208ENST00000494334 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
COL1A1-208ENST00000494334 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-208ENST00000494334 JAG2Q9Y219 1238 aa16.73■□□□□ 0.27
COL1A1-208ENST00000494334 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
COL1A1-208ENST00000494334 H7C1D1 291 aa16.72■□□□□ 0.27
COL1A1-208ENST00000494334 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-208ENST00000494334 HSP90AB4PQ58FF6 505 aa16.72■□□□□ 0.27
COL1A1-208ENST00000494334 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
COL1A1-208ENST00000494334 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
COL1A1-208ENST00000494334 NEUROD6Q96NK8 337 aa16.72■□□□□ 0.27
COL1A1-208ENST00000494334 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
COL1A1-208ENST00000494334 SCN4AP35499 1836 aa16.72■□□□□ 0.27
COL1A1-208ENST00000494334 FAM205AQ6ZU69 1335 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 MYO3BQ8WXR4 1341 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 ZNF609O15014 1411 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-208ENST00000494334 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 CCDC102BQ68D86 513 aa16.71■□□□□ 0.27
COL1A1-208ENST00000494334 USP50Q70EL3 339 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms