RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 LRRCC1Q9C099 1032 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
BRCA1-223ENST00000494123 SBF1O95248 1867 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 FGFR2P21802 821 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 JDP2Q8WYK2 163 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 NEUROD6Q96NK8 337 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 IL1RAPL2Q9NP60 686 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 GPR108Q9NPR9 543 aa17.94■□□□□ 0.46
BRCA1-223ENST00000494123 ZNF609O15014 1411 aa17.93■□□□□ 0.46
BRCA1-223ENST00000494123 A0A1B0GUL7 405 aa17.93■□□□□ 0.46
BRCA1-223ENST00000494123 KLRK1P26718 216 aa17.93■□□□□ 0.46
BRCA1-223ENST00000494123 TNNI3KQ59H18 835 aa17.93■□□□□ 0.46
BRCA1-223ENST00000494123 CLASRPQ8N2M8 674 aaKnown RBP17.93■□□□□ 0.46
BRCA1-223ENST00000494123 RNF181Q9P0P0 153 aa17.93■□□□□ 0.46
BRCA1-223ENST00000494123 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.93■□□□□ 0.46
BRCA1-223ENST00000494123 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
BRCA1-223ENST00000494123 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
BRCA1-223ENST00000494123 ZNF804AQ7Z570 1209 aa17.92■□□□□ 0.46
BRCA1-223ENST00000494123 VPS37DQ86XT2 251 aa17.92■□□□□ 0.46
BRCA1-223ENST00000494123 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
BRCA1-223ENST00000494123 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
BRCA1-223ENST00000494123 ARAP2Q8WZ64 1704 aa17.92■□□□□ 0.46
BRCA1-223ENST00000494123 DICER1Q9UPY3 1922 aaKnown RBP17.92■□□□□ 0.46
BRCA1-223ENST00000494123 PRELPP51888 382 aa17.91■□□□□ 0.46
BRCA1-223ENST00000494123 TIMM10P62072 90 aa17.91■□□□□ 0.46
BRCA1-223ENST00000494123 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
BRCA1-223ENST00000494123 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
BRCA1-223ENST00000494123 C15orf52Q6ZUT6 534 aaKnown RBP17.91■□□□□ 0.46
BRCA1-223ENST00000494123 AACSQ86V21 672 aa17.91■□□□□ 0.46
BRCA1-223ENST00000494123 TXNRD3Q86VQ6 643 aa17.91■□□□□ 0.46
BRCA1-223ENST00000494123 GYG1P46976 350 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 ANKRD45Q5TZF3 282 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 DBNDD1Q9H9R9 158 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
BRCA1-223ENST00000494123 HIBADHP31937 336 aaKnown RBP17.9■□□□□ 0.46
BRCA1-223ENST00000494123 B4GALNT3Q6L9W6 998 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 XAGE2Q96GT9 111 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
BRCA1-223ENST00000494123 IRS2Q9Y4H2 1338 aa17.89■□□□□ 0.46
BRCA1-223ENST00000494123 ECE2O60344 883 aa17.89■□□□□ 0.45
BRCA1-223ENST00000494123 IFIT2P09913 472 aaKnown RBP17.89■□□□□ 0.45
BRCA1-223ENST00000494123 EAF2Q96CJ1 260 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-223ENST00000494123 FAM84BQ96KN1 310 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-223ENST00000494123 COA1Q9GZY4 146 aa17.89■□□□□ 0.45
BRCA1-223ENST00000494123 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-223ENST00000494123 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
BRCA1-223ENST00000494123 CHD4Q14839 1912 aa17.88■□□□□ 0.45
BRCA1-223ENST00000494123 COL4A5P29400 1685 aa17.88■□□□□ 0.45
BRCA1-223ENST00000494123 ADORA1P30542 326 aa17.88■□□□□ 0.45
BRCA1-223ENST00000494123 BCAMP50895 628 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 DBNDD2Q9BQY9 259 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
BRCA1-223ENST00000494123 ZNRF3Q9ULT6 936 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 UTRNP46939 3433 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
BRCA1-223ENST00000494123 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 PODNQ7Z5L7 613 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 CD209Q9NNX6 404 aa17.87■□□□□ 0.45
BRCA1-223ENST00000494123 EIF6P56537 245 aaKnown RBP17.86■□□□□ 0.45
BRCA1-223ENST00000494123 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
BRCA1-223ENST00000494123 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
BRCA1-223ENST00000494123 FBXO33Q7Z6M2 555 aa17.86■□□□□ 0.45
BRCA1-223ENST00000494123 TLR7Q9NYK1 1049 aaKnown RBP17.86■□□□□ 0.45
BRCA1-223ENST00000494123 DBNLQ9UJU6 430 aaKnown RBP17.86■□□□□ 0.45
BRCA1-223ENST00000494123 MYH13Q9UKX3 1938 aa17.85■□□□□ 0.45
BRCA1-223ENST00000494123 PHKA1P46020 1223 aa17.85■□□□□ 0.45
BRCA1-223ENST00000494123 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
BRCA1-223ENST00000494123 FBXW7Q969H0 707 aa17.85■□□□□ 0.45
BRCA1-223ENST00000494123 IL1R1P14778 569 aa17.84■□□□□ 0.45
BRCA1-223ENST00000494123 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
BRCA1-223ENST00000494123 LNPKQ9C0E8 428 aa17.84■□□□□ 0.45
BRCA1-223ENST00000494123 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
BRCA1-223ENST00000494123 ZC3H4Q9UPT8 1303 aaKnown RBP17.84■□□□□ 0.45
BRCA1-223ENST00000494123 YDJCA8MPS7 323 aa17.83■□□□□ 0.45
BRCA1-223ENST00000494123 FZD9O00144 591 aa17.83■□□□□ 0.45
BRCA1-223ENST00000494123 NUCB1Q02818 461 aa17.83■□□□□ 0.45
BRCA1-223ENST00000494123 GPATCH3Q96I76 525 aa17.83■□□□□ 0.45
BRCA1-223ENST00000494123 RAD17O75943 681 aa17.83■□□□□ 0.44
BRCA1-223ENST00000494123 UQCRFS1P1P0C7P4 283 aa17.83■□□□□ 0.44
BRCA1-223ENST00000494123 TDRD7Q8NHU6 1098 aaKnown RBP17.83■□□□□ 0.44
BRCA1-223ENST00000494123 KDM2BQ8NHM5 1336 aa17.83■□□□□ 0.44
BRCA1-223ENST00000494123 SCN9AQ15858 1988 aa17.82■□□□□ 0.44
BRCA1-223ENST00000494123 SEMA3EO15041 775 aa17.82■□□□□ 0.44
BRCA1-223ENST00000494123 TNIP1Q15025 636 aa17.82■□□□□ 0.44
BRCA1-223ENST00000494123 CIAPIN1Q6FI81 312 aa17.82■□□□□ 0.44
BRCA1-223ENST00000494123 KCNQ5Q9NR82 932 aa17.82■□□□□ 0.44
BRCA1-223ENST00000494123 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 GTF2IP78347 998 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 CXCL9Q07325 125 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 CHAF1AQ13111 956 aaPredicted RBP17.81■□□□□ 0.44
BRCA1-223ENST00000494123 TTLL5Q6EMB2 1281 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
BRCA1-223ENST00000494123 DENND2AQ9ULE3 1009 aa17.81■□□□□ 0.44
BRCA1-223ENST00000494123 GJA3Q9Y6H8 435 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms