RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 FOXO4P98177 505 aa18.62■□□□□ 0.57
ATG4B-223ENST00000493618 SLC4A10Q6U841 1118 aa18.62■□□□□ 0.57
ATG4B-223ENST00000493618 USP17L1Q7RTZ2 530 aa18.62■□□□□ 0.57
ATG4B-223ENST00000493618 GGA3Q9NZ52 723 aa18.62■□□□□ 0.57
ATG4B-223ENST00000493618 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
ATG4B-223ENST00000493618 ZNF609O15014 1411 aa18.61■□□□□ 0.57
ATG4B-223ENST00000493618 ZNF804BA4D1E1 1349 aa18.61■□□□□ 0.57
ATG4B-223ENST00000493618 ANKRD18BA2A2Z9 1011 aa18.61■□□□□ 0.57
ATG4B-223ENST00000493618 MAP2K1Q02750 393 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-223ENST00000493618 CHRNDQ07001 517 aa18.61■□□□□ 0.57
ATG4B-223ENST00000493618 PODNQ7Z5L7 613 aa18.61■□□□□ 0.57
ATG4B-223ENST00000493618 AGBL3Q8NEM8 1001 aa18.61■□□□□ 0.57
ATG4B-223ENST00000493618 HSPA8P11142 646 aaKnown RBP18.6■□□□□ 0.57
ATG4B-223ENST00000493618 ZNF280AP59817 542 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-223ENST00000493618 SCARF1Q14162 830 aa18.6■□□□□ 0.57
ATG4B-223ENST00000493618 EPHA10Q5JZY3 1008 aa18.6■□□□□ 0.57
ATG4B-223ENST00000493618 HELBQ8NG08 1087 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-223ENST00000493618 GMLQ99445 158 aa18.6■□□□□ 0.57
ATG4B-223ENST00000493618 ANKRD2Q9GZV1 360 aa18.6■□□□□ 0.57
ATG4B-223ENST00000493618 LEMD3Q9Y2U8 911 aa18.6■□□□□ 0.57
ATG4B-223ENST00000493618 SNAP23O00161 211 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 GRM8O00222 908 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 TAF5LO75529 589 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 USP17L8P0C7I0 530 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 KCNJ4P48050 445 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 ANGEL2Q5VTE6 544 aaKnown RBP18.59■□□□□ 0.57
ATG4B-223ENST00000493618 LMBR1LQ6UX01 489 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 MYOZ2Q9NPC6 264 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 PRDM10Q9NQV6 1147 aa18.59■□□□□ 0.57
ATG4B-223ENST00000493618 SCAF8Q9UPN6 1271 aaKnown RBP18.59■□□□□ 0.57
ATG4B-223ENST00000493618 HUNKP57058 714 aa18.58■□□□□ 0.56
ATG4B-223ENST00000493618 IFIT5Q13325 482 aaKnown RBP18.58■□□□□ 0.56
ATG4B-223ENST00000493618 DACT2Q5SW24 774 aa18.58■□□□□ 0.56
ATG4B-223ENST00000493618 SULF1Q8IWU6 871 aa18.58■□□□□ 0.56
ATG4B-223ENST00000493618 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-223ENST00000493618 COA1Q9GZY4 146 aa18.58■□□□□ 0.56
ATG4B-223ENST00000493618 C9orf78Q9NZ63 289 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-223ENST00000493618 TSKSQ9UJT2 592 aa18.58■□□□□ 0.56
ATG4B-223ENST00000493618 SRCIN1Q9C0H9 1055 aa18.57■□□□□ 0.56
ATG4B-223ENST00000493618 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-223ENST00000493618 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
ATG4B-223ENST00000493618 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
ATG4B-223ENST00000493618 HHIPL1Q96JK4 782 aa18.56■□□□□ 0.56
ATG4B-223ENST00000493618 ZIC5Q96T25 663 aa18.56■□□□□ 0.56
ATG4B-223ENST00000493618 BEGAINQ9BUH8 593 aa18.56■□□□□ 0.56
ATG4B-223ENST00000493618 PLIN1O60240 522 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 ALDH1L1O75891 902 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 MAP2K2P36507 400 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 NBPF9Q3BBW0 867 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 TAF7LQ5H9L4 462 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 STRIP1Q5VSL9 837 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 C2orf69Q8N8R5 385 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 ECM29Q5VYK3 1845 aa18.55■□□□□ 0.56
ATG4B-223ENST00000493618 GTF2IP78347 998 aa18.54■□□□□ 0.56
ATG4B-223ENST00000493618 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
ATG4B-223ENST00000493618 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
ATG4B-223ENST00000493618 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 IRS2Q9Y4H2 1338 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 AKAP11Q9UKA4 1901 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 E9PSI1 815 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 SASH1O94885 1247 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 CD209Q9NNX6 404 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 CNNM1Q9NRU3 951 aa18.53■□□□□ 0.56
ATG4B-223ENST00000493618 MYO3BQ8WXR4 1341 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 NBPF7P0C2Y1 421 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-223ENST00000493618 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 PRAMEF18Q5VWM3 479 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 RGMBQ6NW40 437 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 LDHAL6AQ6ZMR3 332 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 KIAA0825Q8IV33 1275 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 SSH1Q8WYL5 1049 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 KAZALD1Q96I82 304 aa18.52■□□□□ 0.56
ATG4B-223ENST00000493618 PAPPA2Q9BXP8 1791 aa18.52■□□□□ 0.55
ATG4B-223ENST00000493618 FAM155AB1AL88 458 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-223ENST00000493618 ZNF157P51786 506 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-223ENST00000493618 OGFOD1Q8N543 542 aa18.51■□□□□ 0.55
ATG4B-223ENST00000493618 JAG2Q9Y219 1238 aa18.51■□□□□ 0.55
ATG4B-223ENST00000493618 PITPNM2Q9BZ72 1349 aa18.5■□□□□ 0.55
ATG4B-223ENST00000493618 WNT10BO00744 389 aa18.5■□□□□ 0.55
ATG4B-223ENST00000493618 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-223ENST00000493618 MOB2Q70IA6 237 aa18.5■□□□□ 0.55
ATG4B-223ENST00000493618 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
ATG4B-223ENST00000493618 NOGQ13253 232 aa18.49■□□□□ 0.55
ATG4B-223ENST00000493618 ZNF804AQ7Z570 1209 aa18.49■□□□□ 0.55
ATG4B-223ENST00000493618 CERS5Q8N5B7 392 aa18.49■□□□□ 0.55
ATG4B-223ENST00000493618 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
ATG4B-223ENST00000493618 ARAP2Q8WZ64 1704 aa18.49■□□□□ 0.55
ATG4B-223ENST00000493618 F8W031 263 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-223ENST00000493618 C15orf52Q6ZUT6 534 aaKnown RBP18.48■□□□□ 0.55
ATG4B-223ENST00000493618 HDAC9Q9UKV0 1011 aa18.48■□□□□ 0.55
ATG4B-223ENST00000493618 UTYO14607 1347 aa18.48■□□□□ 0.55
ATG4B-223ENST00000493618 PTPRCP08575 1304 aa18.48■□□□□ 0.55
ATG4B-223ENST00000493618 KIF23Q02241 960 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-223ENST00000493618 PCDHAC2Q9Y5I4 1007 aa18.47■□□□□ 0.55
ATG4B-223ENST00000493618 IL1R1P14778 569 aa18.46■□□□□ 0.55
ATG4B-223ENST00000493618 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
ATG4B-223ENST00000493618 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
ATG4B-223ENST00000493618 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms