RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 MTX1Q13505 466 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 POLA2Q14181 598 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 LRRC24Q50LG9 513 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 C20orf194Q5TEA3 1177 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 PUS3Q9BZE2 481 aaKnown RBP10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 COA1Q9GZY4 146 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 SUPT16HQ9Y5B9 1047 aaKnown RBP10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 COL4A1P02462 1669 aa10.06□□□□□ -0.8
TM4SF1-204ENST00000493348 MYH13Q9UKX3 1938 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 LTBP1Q14766 1721 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 FZD9O00144 591 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 PDE8BO95263 885 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 GORABQ5T7V8 394 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 GPC2Q8N158 579 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 GPR101Q96P66 508 aaPredicted RBP10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 PA2G4Q9UQ80 394 aaKnown RBP10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 RIPOR2Q9Y4F9 1068 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
TM4SF1-204ENST00000493348 PNMA6EA0A0J9YXQ4 647 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 RAD17O75943 681 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 DDNO94850 711 aaPredicted RBP10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 VEGFAP15692 232 aaPredicted RBP10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 RFX5P48382 616 aaPredicted RBP10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 PRELPP51888 382 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 AAMPQ13685 434 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 SLC51AQ86UW1 340 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 LPIN2Q92539 896 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 ZBTB40Q9NUA8 1239 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 SCN4AP35499 1836 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
TM4SF1-204ENST00000493348 USP17L3A6NCW0 530 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 USP17L4A6NCW7 530 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 HIBADHP31937 336 aaKnown RBP10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 USP17L1Q7RTZ2 530 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 SSH3Q8TE77 659 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 CRBNQ96SW2 442 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 BCL11AQ9H165 835 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 RRAGCQ9HB90 399 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 HACL1Q9UJ83 578 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 ZNF541Q9H0D2 1346 aa10.03□□□□□ -0.8
TM4SF1-204ENST00000493348 H7C1D1 291 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 MYCNP04198 464 aaPredicted RBP10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 NEFLP07196 543 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 RPS12P25398 132 aaKnown RBP10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 CXCL9Q07325 125 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 TFCP2Q12800 502 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 TTLL5Q6EMB2 1281 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 FOXD4L1Q9NU39 408 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 CLEC11AQ9Y240 323 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 PSME4Q14997 1843 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 MYO3BQ8WXR4 1341 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 WDR90Q96KV7 1748 aa10.02□□□□□ -0.81
TM4SF1-204ENST00000493348 SNAP23O00161 211 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 APBB1O00213 710 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 PSMD14O00487 310 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 GYG1P46976 350 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 EAPPQ56P03 285 aaPredicted RBP10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 ATG9AQ7Z3C6 839 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 PNMA8AQ86V59 439 aaPredicted RBP10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 OGFOD1Q8N543 542 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 CD209Q9NNX6 404 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 HDAC9Q9UKV0 1011 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 EXOC6BQ9Y2D4 811 aa10.01□□□□□ -0.81
TM4SF1-204ENST00000493348 A0A1B0GUL7 405 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 YDJCA8MPS7 323 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 RAB11FIP3O75154 756 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 KLRK1P26718 216 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 GMPSP49915 693 aaPredicted RBP10□□□□□ -0.81
TM4SF1-204ENST00000493348 GTF2IP78347 998 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 CHAF1AQ13111 956 aaPredicted RBP10□□□□□ -0.81
TM4SF1-204ENST00000493348 CCDC158Q5M9N0 1113 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 STRIP1Q5VSL9 837 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 RSBN1LQ6PCB5 846 aaPredicted RBP10□□□□□ -0.81
TM4SF1-204ENST00000493348 TXNRD3Q86VQ6 643 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 CLASRPQ8N2M8 674 aaKnown RBP10□□□□□ -0.81
TM4SF1-204ENST00000493348 AGBL3Q8NEM8 1001 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
TM4SF1-204ENST00000493348 NMRK2Q9NPI5 230 aa10□□□□□ -0.81
TM4SF1-204ENST00000493348 SCN9AQ15858 1988 aa9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 IFIT2P09913 472 aaKnown RBP9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 IL1R1P14778 569 aa9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 EPHX2P34913 555 aa9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 MMP14P50281 582 aa9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 TTC39AQ5SRH9 613 aa9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 VGLL2Q8N8G2 317 aa9.99□□□□□ -0.81
TM4SF1-204ENST00000493348 TBC1D22AQ8WUA7 517 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms