RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MCAMP43121 646 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 ZAP70P43403 619 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 PHKA1P46020 1223 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 CHRNDQ07001 517 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 TTF1Q15361 905 aaPredicted RBP10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 CCDC129Q6ZRS4 1044 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 NLRP3Q96P20 1036 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 U3KPZ7 1027 aaPredicted RBP10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 MAST3O60307 1309 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 RPAP1Q9BWH6 1393 aaPredicted RBP10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 MAST2Q6P0Q8 1798 aa10.97□□□□□ -0.65
SMARCC1-208ENST00000492896 CASTP20810 708 aaKnown RBP10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 NFIXQ14938 502 aa10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 TXNRD1Q16881 649 aa10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 ZSCAN25Q6NSZ9 544 aa10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 SEC62Q99442 399 aaKnown RBP10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCC1-208ENST00000492896 CHGBP05060 677 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 PSMA5P28066 241 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 RXRBP28702 533 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 KRT32Q14532 448 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 CNBD1Q8NA66 436 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 APPBP2Q92624 585 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 TMX3Q96JJ7 454 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 TTC14Q96N46 770 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 DSCC1Q9BVC3 393 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 BSDC1Q9NW68 430 aaPredicted RBP10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 CYP46A1Q9Y6A2 500 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 QSER1Q2KHR3 1735 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 NRXN2Q9P2S2 1712 aa10.95□□□□□ -0.66
SMARCC1-208ENST00000492896 M0R2C6 588 aa10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 CUL4AQ13619 759 aa10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 PI16Q6UXB8 463 aa10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 NOL8Q76FK4 1167 aaKnown RBP10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 CELF1Q92879 486 aaKnown RBP10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 CWC22Q9HCG8 908 aaKnown RBP10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 LRRC37AA6NMS7 1700 aa10.94□□□□□ -0.66
SMARCC1-208ENST00000492896 KIAA1551Q9HCM1 1747 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 PLSCR1O15162 318 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 FRAT2O75474 233 aaPredicted RBP10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 CYP2E1P05181 493 aaPredicted RBP10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 GYS1P13807 737 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 ADD2P35612 726 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 AK2P54819 239 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 ST5P78524 1137 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 RAB3GAP1Q15042 981 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 ADCK5Q3MIX3 580 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 VPS53Q5VIR6 699 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 OSBP2Q969R2 916 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 PIH1D3Q9NQM4 214 aaKnown RBP10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 PDRG1Q9NUG6 133 aa10.93□□□□□ -0.66
SMARCC1-208ENST00000492896 SNAP23O00161 211 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 APBA3O96018 575 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 RPS8P62241 208 aaKnown RBP10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 NUCB2P80303 420 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 PRR5LQ6MZQ0 368 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 BLOC1S2Q6QNY1 142 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 ZGPATQ8N5A5 531 aaKnown RBP10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 ANKRD2Q9GZV1 360 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 MINPP1Q9UNW1 487 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 LIMCH1Q9UPQ0 1083 aa10.92□□□□□ -0.66
SMARCC1-208ENST00000492896 ZNF804BA4D1E1 1349 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 IDH1O75874 414 aaKnown RBP10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 HSPD1P10809 573 aaKnown RBP10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 CPA1P15085 419 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 PDE6AP16499 860 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 RPS6KB1P23443 525 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 GRAPQ13588 217 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 ANKRD1Q15327 319 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 UBE3CQ15386 1083 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 PROM2Q8N271 834 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 ZSCAN31Q96LW9 406 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 GBP4Q96PP9 640 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 GNL3LQ9NVN8 582 aaKnown RBP10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
SMARCC1-208ENST00000492896 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.66
SMARCC1-208ENST00000492896 COL11A2P13942 1736 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-208ENST00000492896 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
SMARCC1-208ENST00000492896 COL1A1P02452 1464 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-208ENST00000492896 GPAA1O43292 621 aa10.9□□□□□ -0.66
SMARCC1-208ENST00000492896 SERPINB2P05120 415 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms