RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PAPPA2Q9BXP8 1791 aa12.01□□□□□ -0.49
SNX17-207ENST00000489402 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
SNX17-207ENST00000489402 KIF23Q02241 960 aaPredicted RBP12.01□□□□□ -0.49
SNX17-207ENST00000489402 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
SNX17-207ENST00000489402 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
SNX17-207ENST00000489402 MYOZ2Q9NPC6 264 aa12.01□□□□□ -0.49
SNX17-207ENST00000489402 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
SNX17-207ENST00000489402 ZNF646O15015 1829 aaPredicted RBP12.01□□□□□ -0.49
SNX17-207ENST00000489402 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
SNX17-207ENST00000489402 MED23Q9ULK4 1368 aa12.01□□□□□ -0.49
SNX17-207ENST00000489402 SLC10A3P09131 477 aa12□□□□□ -0.49
SNX17-207ENST00000489402 FKBP1BP68106 108 aa12□□□□□ -0.49
SNX17-207ENST00000489402 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
SNX17-207ENST00000489402 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
SNX17-207ENST00000489402 GREM2Q9H772 168 aa12□□□□□ -0.49
SNX17-207ENST00000489402 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
SNX17-207ENST00000489402 NEURL1BA8MQ27 555 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 IGHMBP2P38935 993 aaKnown RBP11.99□□□□□ -0.49
SNX17-207ENST00000489402 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
SNX17-207ENST00000489402 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 TWISTNBQ3B726 338 aaPredicted RBP11.99□□□□□ -0.49
SNX17-207ENST00000489402 UBE3BQ7Z3V4 1068 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
SNX17-207ENST00000489402 OGFOD1Q8N543 542 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 FBXW7Q969H0 707 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 GMLQ99445 158 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
SNX17-207ENST00000489402 TRPA1O75762 1119 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 KLRK1P26718 216 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 RGS19P49795 217 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 PRAMEF18Q5VWM3 479 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 TXNRD3Q86VQ6 643 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 COA1Q9GZY4 146 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 RNF186Q9NXI6 227 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
SNX17-207ENST00000489402 SNAP23O00161 211 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 NF2P35240 595 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 MPHOSPH8Q99549 860 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 ANKRD2Q9GZV1 360 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 CACNA1FO60840 1977 aa11.97□□□□□ -0.49
SNX17-207ENST00000489402 IL16Q14005 1332 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 H7C1W4 665 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 ITGA6P23229 1130 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 KCNJ4P48050 445 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 MMP14P50281 582 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 FLIIQ13045 1269 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 TTLL12Q14166 644 aaPredicted RBP11.96□□□□□ -0.49
SNX17-207ENST00000489402 GCKRQ14397 625 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 DACT2Q5SW24 774 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 CSRNP1Q96S65 589 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
SNX17-207ENST00000489402 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
SNX17-207ENST00000489402 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
SNX17-207ENST00000489402 WNT10BO00744 389 aa11.95□□□□□ -0.5
SNX17-207ENST00000489402 CASP7P55210 303 aa11.95□□□□□ -0.5
SNX17-207ENST00000489402 FKBP5Q13451 457 aaPredicted RBP11.95□□□□□ -0.5
SNX17-207ENST00000489402 NBPF9Q3BBW0 867 aa11.95□□□□□ -0.5
SNX17-207ENST00000489402 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
SNX17-207ENST00000489402 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
SNX17-207ENST00000489402 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
SNX17-207ENST00000489402 TTLL5Q6EMB2 1281 aa11.94□□□□□ -0.5
SNX17-207ENST00000489402 APOBEC3FQ8IUX4 373 aaKnown RBP11.94□□□□□ -0.5
SNX17-207ENST00000489402 LINS1Q8NG48 757 aa11.94□□□□□ -0.5
SNX17-207ENST00000489402 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 ARMC9Q7Z3E5 817 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 CTU1Q7Z7A3 348 aaKnown RBP11.93□□□□□ -0.5
SNX17-207ENST00000489402 KIAA0825Q8IV33 1275 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 FZD1Q9UP38 647 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 PCDHAC2Q9Y5I4 1007 aa11.93□□□□□ -0.5
SNX17-207ENST00000489402 SASH1O94885 1247 aa11.92□□□□□ -0.5
SNX17-207ENST00000489402 CSF1RP07333 972 aa11.92□□□□□ -0.5
SNX17-207ENST00000489402 GTF2IP78347 998 aa11.92□□□□□ -0.5
SNX17-207ENST00000489402 CHRNDQ07001 517 aa11.92□□□□□ -0.5
SNX17-207ENST00000489402 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
SNX17-207ENST00000489402 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
SNX17-207ENST00000489402 AOX1Q06278 1338 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 ECM29Q5VYK3 1845 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
SNX17-207ENST00000489402 F6X3S4 739 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
SNX17-207ENST00000489402 EPHA10Q5JZY3 1008 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
SNX17-207ENST00000489402 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 A0A1B0GUL6 1792 aa11.91□□□□□ -0.5
SNX17-207ENST00000489402 IRS2Q9Y4H2 1338 aa11.9□□□□□ -0.5
SNX17-207ENST00000489402 VAMP4O75379 141 aa11.9□□□□□ -0.5
SNX17-207ENST00000489402 TAF5LO75529 589 aa11.9□□□□□ -0.5
SNX17-207ENST00000489402 SOX10P56693 466 aa11.9□□□□□ -0.5
SNX17-207ENST00000489402 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
SNX17-207ENST00000489402 PRKG1Q13976 671 aa11.9□□□□□ -0.5
SNX17-207ENST00000489402 DLGAP5Q15398 846 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms