RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 DIEXFQ68CQ4 756 aaKnown RBP17.72■□□□□ 0.43
VTI1A-206ENST00000489142 KAZALD1Q96I82 304 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 LEMD3Q9Y2U8 911 aa17.72■□□□□ 0.43
VTI1A-206ENST00000489142 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 PLIN1O60240 522 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 CELF2O95319 508 aaKnown RBP17.71■□□□□ 0.43
VTI1A-206ENST00000489142 GRM1Q13255 1194 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 PODNQ7Z5L7 613 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
VTI1A-206ENST00000489142 RASSF10A6NK89 507 aa17.7■□□□□ 0.42
VTI1A-206ENST00000489142 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
VTI1A-206ENST00000489142 DEFB115Q30KQ5 88 aa17.7■□□□□ 0.42
VTI1A-206ENST00000489142 PAXIP1Q6ZW49 1069 aaPredicted RBP17.7■□□□□ 0.42
VTI1A-206ENST00000489142 ZC3H15Q8WU90 426 aaKnown RBP17.7■□□□□ 0.42
VTI1A-206ENST00000489142 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
VTI1A-206ENST00000489142 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
VTI1A-206ENST00000489142 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
VTI1A-206ENST00000489142 GMLQ99445 158 aa17.69■□□□□ 0.42
VTI1A-206ENST00000489142 COA1Q9GZY4 146 aa17.69■□□□□ 0.42
VTI1A-206ENST00000489142 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
VTI1A-206ENST00000489142 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
VTI1A-206ENST00000489142 ZNF609O15014 1411 aa17.68■□□□□ 0.42
VTI1A-206ENST00000489142 DACT2Q5SW24 774 aa17.68■□□□□ 0.42
VTI1A-206ENST00000489142 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
VTI1A-206ENST00000489142 KRT26Q7Z3Y9 468 aa17.68■□□□□ 0.42
VTI1A-206ENST00000489142 PUS3Q9BZE2 481 aaKnown RBP17.68■□□□□ 0.42
VTI1A-206ENST00000489142 GGA3Q9NZ52 723 aa17.68■□□□□ 0.42
VTI1A-206ENST00000489142 SCAF8Q9UPN6 1271 aaKnown RBP17.68■□□□□ 0.42
VTI1A-206ENST00000489142 UTYO14607 1347 aa17.68■□□□□ 0.42
VTI1A-206ENST00000489142 USP17L8P0C7I0 530 aa17.67■□□□□ 0.42
VTI1A-206ENST00000489142 ZNF280AP59817 542 aaPredicted RBP17.67■□□□□ 0.42
VTI1A-206ENST00000489142 CYP4F22Q6NT55 531 aa17.67■□□□□ 0.42
VTI1A-206ENST00000489142 ANKRD44Q8N8A2 993 aa17.67■□□□□ 0.42
VTI1A-206ENST00000489142 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
VTI1A-206ENST00000489142 TLL2Q9Y6L7 1015 aa17.67■□□□□ 0.42
VTI1A-206ENST00000489142 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
VTI1A-206ENST00000489142 IRS2Q9Y4H2 1338 aa17.67■□□□□ 0.42
VTI1A-206ENST00000489142 SCARF1Q14162 830 aa17.66■□□□□ 0.42
VTI1A-206ENST00000489142 COL13A1Q5TAT6 717 aaPredicted RBP17.66■□□□□ 0.42
VTI1A-206ENST00000489142 DCPSQ96C86 337 aaKnown RBP17.66■□□□□ 0.42
VTI1A-206ENST00000489142 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
VTI1A-206ENST00000489142 MYOZ2Q9NPC6 264 aa17.66■□□□□ 0.42
VTI1A-206ENST00000489142 GTF2IP78347 998 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 STRIP1Q5VSL9 837 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 ANGEL2Q5VTE6 544 aaKnown RBP17.65■□□□□ 0.42
VTI1A-206ENST00000489142 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 CAPNS2Q96L46 248 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 CD209Q9NNX6 404 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 JAG2Q9Y219 1238 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 THSD7BQ9C0I4 1608 aa17.65■□□□□ 0.42
VTI1A-206ENST00000489142 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
VTI1A-206ENST00000489142 SAPCD2Q86UD0 394 aa17.64■□□□□ 0.41
VTI1A-206ENST00000489142 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
VTI1A-206ENST00000489142 FOXN1O15353 648 aa17.63■□□□□ 0.41
VTI1A-206ENST00000489142 SASH1O94885 1247 aa17.63■□□□□ 0.41
VTI1A-206ENST00000489142 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
VTI1A-206ENST00000489142 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
VTI1A-206ENST00000489142 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
VTI1A-206ENST00000489142 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
VTI1A-206ENST00000489142 SULF1Q8IWU6 871 aa17.63■□□□□ 0.41
VTI1A-206ENST00000489142 AOC2O75106 756 aa17.62■□□□□ 0.41
VTI1A-206ENST00000489142 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
VTI1A-206ENST00000489142 ZNF804AQ7Z570 1209 aa17.62■□□□□ 0.41
VTI1A-206ENST00000489142 GYG1P46976 350 aa17.61■□□□□ 0.41
VTI1A-206ENST00000489142 C15orf52Q6ZUT6 534 aaKnown RBP17.61■□□□□ 0.41
VTI1A-206ENST00000489142 CERS5Q8N5B7 392 aa17.61■□□□□ 0.41
VTI1A-206ENST00000489142 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
VTI1A-206ENST00000489142 MYO3BQ8WXR4 1341 aa17.61■□□□□ 0.41
VTI1A-206ENST00000489142 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
VTI1A-206ENST00000489142 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
VTI1A-206ENST00000489142 OGFOD1Q8N543 542 aa17.6■□□□□ 0.41
VTI1A-206ENST00000489142 CDCA5Q96FF9 252 aa17.6■□□□□ 0.41
VTI1A-206ENST00000489142 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 IL1R1P14778 569 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 ECE1P42892 770 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 HUNKP57058 714 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 PRAMEF18Q5VWM3 479 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 AIDAQ96BJ3 306 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
VTI1A-206ENST00000489142 GBA2Q9HCG7 927 aaPredicted RBP17.59■□□□□ 0.41
VTI1A-206ENST00000489142 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 PCDHAC2Q9Y5I4 1007 aa17.59■□□□□ 0.41
VTI1A-206ENST00000489142 ARAP2Q8WZ64 1704 aa17.58■□□□□ 0.41
VTI1A-206ENST00000489142 WNT10BO00744 389 aa17.58■□□□□ 0.4
VTI1A-206ENST00000489142 BCAR3O75815 825 aa17.58■□□□□ 0.4
VTI1A-206ENST00000489142 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
VTI1A-206ENST00000489142 BRPF1P55201 1214 aaPredicted RBP17.58■□□□□ 0.4
VTI1A-206ENST00000489142 UBE4AQ14139 1066 aa17.58■□□□□ 0.4
VTI1A-206ENST00000489142 IQSEC3Q9UPP2 1182 aaPredicted RBP17.58■□□□□ 0.4
VTI1A-206ENST00000489142 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.4
VTI1A-206ENST00000489142 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
VTI1A-206ENST00000489142 FAM84BQ96KN1 310 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms