RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 COPRSQ9NQ92 184 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 DZANK1Q9NVP4 752 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
SRRM1-215ENST00000488317 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 FBXO24O75426 580 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 BMP4P12644 408 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 HOXD8P13378 290 aaPredicted RBP7.29□□□□□ -1.24
SRRM1-215ENST00000488317 PCSK7Q16549 785 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 MAP3K11Q16584 847 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 TPTE2Q6XPS3 522 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 ERMP1Q7Z2K6 904 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 SYT9Q86SS6 491 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 MICALL1Q8N3F8 863 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 TRPM4Q8TD43 1214 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 CNTNAP3BQ96NU0 1288 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 HHIPQ96QV1 700 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 CNTNAP3Q9BZ76 1288 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 KBTBD4Q9NVX7 518 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 PPM1HQ9ULR3 514 aa7.29□□□□□ -1.24
SRRM1-215ENST00000488317 METTL12A8MUP2 240 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 MINDY4BA8MYZ0 360 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 ZBTB42B2RXF5 422 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 F6X3S4 739 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 PDE2AO00408 941 aaPredicted RBP7.28□□□□□ -1.24
SRRM1-215ENST00000488317 EIF2AK2P19525 551 aaKnown RBP7.28□□□□□ -1.24
SRRM1-215ENST00000488317 ATP2B1P20020 1258 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 GBP2P32456 591 aaPredicted RBP7.28□□□□□ -1.24
SRRM1-215ENST00000488317 GRIA4P48058 902 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 GPLD1P80108 840 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 ARID5AQ03989 594 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 PWP1Q13610 501 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 RASSF4Q9H2L5 321 aa7.28□□□□□ -1.24
SRRM1-215ENST00000488317 DNAJB12Q9NXW2 375 aaKnown RBP7.28□□□□□ -1.24
SRRM1-215ENST00000488317 A0A096LPE4 126 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 A0A1W2PPZ6 126 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 POTECB2RU33 542 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 RLBP1P12271 317 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 PCBP4P57723 403 aaKnown RBP7.27□□□□□ -1.25
SRRM1-215ENST00000488317 ATP11AP98196 1134 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 TMEM102Q8N9M5 508 aaPredicted RBP7.27□□□□□ -1.25
SRRM1-215ENST00000488317 NXPE3Q969Y0 559 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 RSRP1Q9BUV0 290 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 CEP44Q9C0F1 390 aa7.27□□□□□ -1.25
SRRM1-215ENST00000488317 SMNDC1O75940 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
SRRM1-215ENST00000488317 GTF2F1P35269 517 aaKnown RBP eCLIP7.26□□□□□ -1.25
SRRM1-215ENST00000488317 PAK2Q13177 524 aa7.26□□□□□ -1.25
SRRM1-215ENST00000488317 CEP135Q66GS9 1140 aa7.26□□□□□ -1.25
SRRM1-215ENST00000488317 SV2BQ7L1I2 683 aa7.26□□□□□ -1.25
SRRM1-215ENST00000488317 TRIM56Q9BRZ2 755 aaKnown RBP7.26□□□□□ -1.25
SRRM1-215ENST00000488317 SPON2Q9BUD6 331 aa7.26□□□□□ -1.25
SRRM1-215ENST00000488317 NFKBIEO00221 500 aa7.25□□□□□ -1.25
SRRM1-215ENST00000488317 CPB1P15086 417 aa7.25□□□□□ -1.25
SRRM1-215ENST00000488317 MX2P20592 715 aa7.25□□□□□ -1.25
SRRM1-215ENST00000488317 ZNF468Q5VIY5 522 aaPredicted RBP7.25□□□□□ -1.25
SRRM1-215ENST00000488317 Q6ZNB5 142 aa7.25□□□□□ -1.25
SRRM1-215ENST00000488317 FAM35AQ86V20 835 aa7.25□□□□□ -1.25
SRRM1-215ENST00000488317 DHX38Q92620 1227 aaKnown RBP7.25□□□□□ -1.25
SRRM1-215ENST00000488317 BHLHE41Q9C0J9 482 aaPredicted RBP7.25□□□□□ -1.25
SRRM1-215ENST00000488317 GPN3Q9UHW5 284 aaPredicted RBP7.25□□□□□ -1.25
SRRM1-215ENST00000488317 FAM177BA6PVY3 158 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 C2CD2LO14523 706 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 SIN3BO75182 1162 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 ITPKAP23677 461 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 KIAA0825Q8IV33 1275 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 GPRASP2Q96D09 838 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 TMEM74Q96NL1 305 aa7.24□□□□□ -1.25
SRRM1-215ENST00000488317 POP1Q99575 1024 aaKnown RBP7.24□□□□□ -1.25
SRRM1-215ENST00000488317 CELA3AP09093 270 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 LMNB1P20700 586 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 EIF4A3P38919 411 aaKnown RBP7.23□□□□□ -1.25
SRRM1-215ENST00000488317 ZNF157P51786 506 aaPredicted RBP7.23□□□□□ -1.25
SRRM1-215ENST00000488317 MAP3K10Q02779 954 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 ELMSAN1Q6PJG2 1045 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 PLD4Q96BZ4 506 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 GMLQ99445 158 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 DNAJC2Q99543 621 aaKnown RBP7.23□□□□□ -1.25
SRRM1-215ENST00000488317 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRRM1-215ENST00000488317 ZNF576Q9H609 170 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 SEC31BQ9NQW1 1179 aa7.23□□□□□ -1.25
SRRM1-215ENST00000488317 GJA8P48165 433 aa7.22□□□□□ -1.25
SRRM1-215ENST00000488317 LIG3P49916 1009 aa7.22□□□□□ -1.25
SRRM1-215ENST00000488317 RPS26P11Q5JNZ5 115 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-215ENST00000488317 ZNF296Q8WUU4 475 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-215ENST00000488317 NANOS1Q8WY41 292 aaKnown RBP7.22□□□□□ -1.25
SRRM1-215ENST00000488317 BSNDQ8WZ55 320 aa7.22□□□□□ -1.25
SRRM1-215ENST00000488317 NECAB3Q96P71 396 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-215ENST00000488317 MUC3BQ9H195 1237 aa7.22□□□□□ -1.25
SRRM1-215ENST00000488317 ADAMTS1Q9UHI8 967 aa7.22□□□□□ -1.25
SRRM1-215ENST00000488317 SLC6A14Q9UN76 642 aa7.22□□□□□ -1.25
SRRM1-215ENST00000488317 NSFL1CQ9UNZ2 370 aaKnown RBP7.22□□□□□ -1.25
SRRM1-215ENST00000488317 PTPRAP18433 802 aa7.21□□□□□ -1.26
SRRM1-215ENST00000488317 ADH6P28332 368 aa7.21□□□□□ -1.26
SRRM1-215ENST00000488317 ADH7P40394 386 aa7.21□□□□□ -1.26
SRRM1-215ENST00000488317 FAM160A1Q05DH4 1040 aa7.21□□□□□ -1.26
SRRM1-215ENST00000488317 PPP2R3AQ06190 1150 aa7.21□□□□□ -1.26
SRRM1-215ENST00000488317 SNAP47Q5SQN1 464 aa7.21□□□□□ -1.26
SRRM1-215ENST00000488317 PERM1Q5SV97 790 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms