RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
PDAP1-203ENST00000488214 REC8O95072 547 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 PDE6BP35913 854 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 PHKA1P46020 1223 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
PDAP1-203ENST00000488214 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 BRIP1Q9BX63 1249 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 ANKRD2Q9GZV1 360 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 ANO2Q9NQ90 1003 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 SNRKQ9NRH2 765 aa8.38□□□□□ -1.07
PDAP1-203ENST00000488214 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 XDHP47989 1333 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 A0A0D9SFI3 127 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 KLRK1P26718 216 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 ARID4AP29374 1257 aaPredicted RBP8.37□□□□□ -1.07
PDAP1-203ENST00000488214 MCAMP43121 646 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDAP1-203ENST00000488214 NMIQ13287 307 aaPredicted RBP8.37□□□□□ -1.07
PDAP1-203ENST00000488214 UBE4AQ14139 1066 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 SCARF1Q14162 830 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 KBTBD3Q8NAB2 608 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 RUFY2Q8WXA3 655 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 IL25Q9H293 177 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
PDAP1-203ENST00000488214 ZNF804BA4D1E1 1349 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 LAMB1P07942 1786 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 KLRG2A4D1S0 409 aaPredicted RBP8.36□□□□□ -1.07
PDAP1-203ENST00000488214 SGSM2O43147 1006 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 NPR1P16066 1061 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
PDAP1-203ENST00000488214 ZAP70P43403 619 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 GYG1P46976 350 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 RASGRF1Q13972 1273 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 VPS37DQ86XT2 251 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.071e-6■□□□□ 8
PDAP1-203ENST00000488214 FAM227BQ96M60 508 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 CRAMP1Q96RY5 1269 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 ANTXR1Q9H6X2 564 aa8.36□□□□□ -1.07
PDAP1-203ENST00000488214 NAV1Q8NEY1 1877 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 UFL1O94874 794 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 ZBTB7AO95365 584 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 CHGBP05060 677 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 SRGNP10124 158 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 MCCP23508 829 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 BCAMP50895 628 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 R3HDM1Q15032 1099 aaKnown RBP8.35□□□□□ -1.07
PDAP1-203ENST00000488214 CAVIN4Q5BKX8 364 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 SPATA5Q8NB90 893 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.071e-22■□□□□ 10.6
PDAP1-203ENST00000488214 MASTLQ96GX5 879 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 DDRGK1Q96HY6 314 aa8.35□□□□□ -1.07
PDAP1-203ENST00000488214 ZNF512BQ96KM6 892 aaPredicted RBP8.35□□□□□ -1.07
PDAP1-203ENST00000488214 GNL3LQ9NVN8 582 aaKnown RBP8.35□□□□□ -1.07
PDAP1-203ENST00000488214 IQSEC3Q9UPP2 1182 aaPredicted RBP8.35□□□□□ -1.07
PDAP1-203ENST00000488214 ZNF646O15015 1829 aaPredicted RBP8.35□□□□□ -1.07
PDAP1-203ENST00000488214 CCDC171Q6TFL3 1326 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 PSME4Q14997 1843 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 WTIPA6NIX2 430 aaPredicted RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 H0YIN7 160 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 IDH1O75874 414 aaKnown RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 BBOX1O75936 387 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 CHRNA5P30532 468 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 ALDH1B1P30837 517 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 RBM25P49756 843 aaKnown RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 GPSM2P81274 684 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 TTF1Q15361 905 aaPredicted RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 LRRFIP1Q32MZ4 808 aaKnown RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 GPR101Q96P66 508 aaPredicted RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.34□□□□□ -1.072e-11■□□□□ 9.3
PDAP1-203ENST00000488214 PIH1D3Q9NQM4 214 aaKnown RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 HMG20BQ9P0W2 317 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
PDAP1-203ENST00000488214 ADAMTSL1Q8N6G6 1762 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 MYH2Q9UKX2 1941 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 CDK5RAP2Q96SN8 1893 aa8.34□□□□□ -1.07
PDAP1-203ENST00000488214 MAST3O60307 1309 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 PSDA5PKW4 1024 aaPredicted RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 RNF113AO15541 343 aaKnown RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 FRAT2O75474 233 aaPredicted RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 ATP2B4P23634 1241 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 POLD1P28340 1107 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 CHAF1AQ13111 956 aaPredicted RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 WASHC4Q2M389 1173 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 SLFNL1Q499Z3 407 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 STYK1Q6J9G0 422 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 CCDC129Q6ZRS4 1044 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 ZNF804AQ7Z570 1209 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 ZNF589Q86UQ0 364 aaPredicted RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 SEC62Q99442 399 aaKnown RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 MTFR1LQ9H019 292 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms