RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 ST5P78524 1137 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 FAM53CQ9NYF3 392 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 PTPDC1A2A3K4 754 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 ATP1A3P13637 1013 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 H2AFXP16104 143 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 NDUFA8P51970 172 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
COL16A1-214ENST00000488128 ARHGEF25Q86VW2 580 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 UBXN4Q92575 508 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 FAM160A1Q05DH4 1040 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 CALCOCO1Q9P1Z2 691 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 NFAT5O94916 1531 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 CARD6Q9BX69 1037 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 RCOR1Q9UKL0 485 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 FANCGO15287 622 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 CYP2C19P33261 490 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 NSUN7Q8NE18 718 aaKnown RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 ENGASEQ8NFI3 743 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 HIP1O00291 1037 aa16.52■□□□□ 0.23
COL16A1-214ENST00000488128 CAVIN2O95810 425 aa16.52■□□□□ 0.23
COL16A1-214ENST00000488128 GNL2Q13823 731 aaKnown RBP16.52■□□□□ 0.23
COL16A1-214ENST00000488128 KLHL34Q8N239 644 aa16.52■□□□□ 0.23
COL16A1-214ENST00000488128 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.23
COL16A1-214ENST00000488128 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.23
COL16A1-214ENST00000488128 PXDNQ92626 1479 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 LTN1O94822 1766 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 CTAGE5O15320 804 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
COL16A1-214ENST00000488128 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-214ENST00000488128 GRM8O00222 908 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-214ENST00000488128 GSDMDP57764 484 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-214ENST00000488128 NAT10Q9H0A0 1025 aaKnown RBP16.5■□□□□ 0.23
COL16A1-214ENST00000488128 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 MYL6BP14649 208 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 MTX1Q13505 466 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 PROSER2Q86WR7 435 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 RAD51AP2Q09MP3 1159 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 DPF2Q92785 391 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 DBNLQ9UJU6 430 aaKnown RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 HOXB7P09629 217 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 SASH3O75995 380 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 FMR1NBQ8N0W7 255 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 OSBPL5Q9H0X9 879 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 ETF1P62495 437 aaKnown RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 STK38Q15208 465 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 KIAA1468Q9P260 1216 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-214ENST00000488128 TFCP2Q12800 502 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 RGPD2P0DJD1 1756 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 EVCP57679 992 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 KRT32Q14532 448 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 CFAP100Q494V2 611 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 TRIM66O15016 1216 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms