RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 AMIGO3Q86WK7 504 aa24.41■■□□□ 1.5
PHF1-209ENST00000487667 NDUFB9Q9Y6M9 179 aa24.41■■□□□ 1.5
PHF1-209ENST00000487667 NPHP1O15259 732 aa24.4■■□□□ 1.5
PHF1-209ENST00000487667 DSCC1Q9BVC3 393 aa24.4■■□□□ 1.5
PHF1-209ENST00000487667 CHRNDQ07001 517 aa24.39■■□□□ 1.5
PHF1-209ENST00000487667 UBE4AQ14139 1066 aa24.39■■□□□ 1.5
PHF1-209ENST00000487667 ZNF589Q86UQ0 364 aaPredicted RBP24.39■■□□□ 1.49
PHF1-209ENST00000487667 RASEFQ8IZ41 740 aa24.39■■□□□ 1.49
PHF1-209ENST00000487667 CYP46A1Q9Y6A2 500 aa24.39■■□□□ 1.49
PHF1-209ENST00000487667 MCAMP43121 646 aa24.38■■□□□ 1.49
PHF1-209ENST00000487667 ZAP70P43403 619 aa24.38■■□□□ 1.49
PHF1-209ENST00000487667 SLC27A2O14975 620 aa24.37■■□□□ 1.49
PHF1-209ENST00000487667 INTS4Q96HW7 963 aaKnown RBP24.37■■□□□ 1.49
PHF1-209ENST00000487667 ANKRD2Q9GZV1 360 aa24.37■■□□□ 1.49
PHF1-209ENST00000487667 ZSWIM6Q9HCJ5 1215 aa24.37■■□□□ 1.49
PHF1-209ENST00000487667 RPS8P62241 208 aaKnown RBP24.37■■□□□ 1.49
PHF1-209ENST00000487667 NFIXQ14938 502 aa24.37■■□□□ 1.49
PHF1-209ENST00000487667 VPS53Q5VIR6 699 aa24.37■■□□□ 1.49
PHF1-209ENST00000487667 CNBD1Q8NA66 436 aa24.37■■□□□ 1.49
PHF1-209ENST00000487667 HELBQ8NG08 1087 aaPredicted RBP24.37■■□□□ 1.49
PHF1-209ENST00000487667 APPBP2Q92624 585 aa24.36■■□□□ 1.49
PHF1-209ENST00000487667 TMX3Q96JJ7 454 aa24.36■■□□□ 1.49
PHF1-209ENST00000487667 UPF3BQ9BZI7 483 aaKnown RBP24.36■■□□□ 1.49
PHF1-209ENST00000487667 GNL3LQ9NVN8 582 aaKnown RBP24.36■■□□□ 1.49
PHF1-209ENST00000487667 CASTP20810 708 aaKnown RBP24.35■■□□□ 1.49
PHF1-209ENST00000487667 EN1Q05925 392 aaPredicted RBP24.35■■□□□ 1.49
PHF1-209ENST00000487667 SF3B2Q13435 895 aaKnown RBP24.35■■□□□ 1.49
PHF1-209ENST00000487667 CUL4AQ13619 759 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 FLAD1Q8NFF5 587 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 JAKMIP1Q96N16 626 aaKnown RBP24.35■■□□□ 1.49
PHF1-209ENST00000487667 AKAP11Q9UKA4 1901 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 CASZ1Q86V15 1759 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 PHKA1P46020 1223 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 NUCB2P80303 420 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 SCARF1Q14162 830 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 TTC14Q96N46 770 aa24.35■■□□□ 1.49
PHF1-209ENST00000487667 TNS1Q9HBL0 1735 aaKnown RBP24.35■■□□□ 1.49
PHF1-209ENST00000487667 UBE3CQ15386 1083 aa24.34■■□□□ 1.49
PHF1-209ENST00000487667 C3orf67Q6ZVT6 689 aa24.34■■□□□ 1.49
PHF1-209ENST00000487667 RUFY3Q7L099 469 aa24.34■■□□□ 1.49
PHF1-209ENST00000487667 RPAP1Q9BWH6 1393 aaPredicted RBP24.34■■□□□ 1.49
PHF1-209ENST00000487667 GYS1P13807 737 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 ST5P78524 1137 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 ANKRD1Q15327 319 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 SPATA5Q8NB90 893 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 ALDH8A1Q9H2A2 487 aaPredicted RBP24.33■■□□□ 1.49
PHF1-209ENST00000487667 MYH7P12883 1935 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 EZH2Q15910 746 aaKnown RBP24.33■■□□□ 1.49
PHF1-209ENST00000487667 ZSCAN31Q96LW9 406 aaPredicted RBP24.33■■□□□ 1.49
PHF1-209ENST00000487667 CTNNA3Q9UI47 895 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 MINPP1Q9UNW1 487 aa24.33■■□□□ 1.49
PHF1-209ENST00000487667 MAST3O60307 1309 aa24.33■■□□□ 1.48
PHF1-209ENST00000487667 WASHC4Q2M389 1173 aa24.32■■□□□ 1.48
PHF1-209ENST00000487667 CAVIN4Q5BKX8 364 aa24.32■■□□□ 1.48
PHF1-209ENST00000487667 SEC62Q99442 399 aaKnown RBP24.32■■□□□ 1.48
PHF1-209ENST00000487667 PDRG1Q9NUG6 133 aa24.32■■□□□ 1.48
PHF1-209ENST00000487667 LIMCH1Q9UPQ0 1083 aa24.32■■□□□ 1.48
PHF1-209ENST00000487667 CYP2E1P05181 493 aaPredicted RBP24.31■■□□□ 1.48
PHF1-209ENST00000487667 HMGB1P09429 215 aaKnown RBP24.31■■□□□ 1.48
PHF1-209ENST00000487667 BLOC1S2Q6QNY1 142 aa24.31■■□□□ 1.48
PHF1-209ENST00000487667 CAMKK2Q96RR4 588 aa24.31■■□□□ 1.48
PHF1-209ENST00000487667 TFCP2L1Q9NZI6 479 aa24.31■■□□□ 1.48
PHF1-209ENST00000487667 ZBTB22O15209 634 aa24.31■■□□□ 1.48
PHF1-209ENST00000487667 MAP3K12Q12852 859 aa24.31■■□□□ 1.48
PHF1-209ENST00000487667 RAB3GAP1Q15042 981 aa24.31■■□□□ 1.48
PHF1-209ENST00000487667 CELF1Q92879 486 aaKnown RBP24.31■■□□□ 1.48
PHF1-209ENST00000487667 TM4SF1P30408 202 aa24.3■■□□□ 1.48
PHF1-209ENST00000487667 ADD2P35612 726 aa24.3■■□□□ 1.48
PHF1-209ENST00000487667 ZNF827Q17R98 1081 aa24.3■■□□□ 1.48
PHF1-209ENST00000487667 SH2B1Q9NRF2 756 aaPredicted RBP24.3■■□□□ 1.48
PHF1-209ENST00000487667 RGPD3A6NKT7 1758 aaPredicted RBP24.3■■□□□ 1.48
PHF1-209ENST00000487667 RGPD4Q7Z3J3 1758 aa24.3■■□□□ 1.48
PHF1-209ENST00000487667 SEMA3EO15041 775 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 CCDC129Q6ZRS4 1044 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 AKT1S1Q96B36 256 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 ZNF804BA4D1E1 1349 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 HSPD1P10809 573 aaKnown RBP24.29■■□□□ 1.48
PHF1-209ENST00000487667 BAG6P46379 1132 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 OSBP2Q969R2 916 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 A0A1B0GUL6 1792 aa24.29■■□□□ 1.48
PHF1-209ENST00000487667 AK2P54819 239 aa24.28■■□□□ 1.48
PHF1-209ENST00000487667 RASGRF1Q13972 1273 aa24.28■■□□□ 1.48
PHF1-209ENST00000487667 PRR5LQ6MZQ0 368 aa24.28■■□□□ 1.48
PHF1-209ENST00000487667 GBP4Q96PP9 640 aa24.28■■□□□ 1.48
PHF1-209ENST00000487667 SERPINB2P05120 415 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 PTMSP20962 102 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 GRAPQ13588 217 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 ADCK5Q3MIX3 580 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 PI16Q6UXB8 463 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 DEFB132Q7Z7B7 95 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 GRAPLQ8TC17 118 aaPredicted RBP24.27■■□□□ 1.48
PHF1-209ENST00000487667 FOXD4L1Q9NU39 408 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 IDH1O75874 414 aaKnown RBP24.27■■□□□ 1.48
PHF1-209ENST00000487667 NLGN1Q8N2Q7 840 aa24.27■■□□□ 1.48
PHF1-209ENST00000487667 M0R2C6 588 aa24.26■■□□□ 1.47
PHF1-209ENST00000487667 IGSF3O75054 1194 aa24.26■■□□□ 1.47
PHF1-209ENST00000487667 FRAT2O75474 233 aaPredicted RBP24.26■■□□□ 1.47
PHF1-209ENST00000487667 RPS6KB1P23443 525 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms