RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 G3BP1Q13283 466 aaKnown RBP eCLIP17.52■□□□□ 0.39
TTC3-219ENST00000485402 MTX1Q13505 466 aa17.52■□□□□ 0.39
TTC3-219ENST00000485402 DDX11Q96FC9 970 aa17.52■□□□□ 0.39
TTC3-219ENST00000485402 FUCA2Q9BTY2 467 aa17.52■□□□□ 0.39
TTC3-219ENST00000485402 GIGYF2Q6Y7W6 1299 aaKnown RBP17.51■□□□□ 0.39
TTC3-219ENST00000485402 SPATA32Q96LK8 384 aa17.51■□□□□ 0.39
TTC3-219ENST00000485402 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
TTC3-219ENST00000485402 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
TTC3-219ENST00000485402 TPCN1Q9ULQ1 816 aa17.51■□□□□ 0.39
TTC3-219ENST00000485402 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
TTC3-219ENST00000485402 CCDC8Q9H0W5 538 aaPredicted RBP17.51■□□□□ 0.39
TTC3-219ENST00000485402 DNAJC25Q9H1X3 360 aa17.51■□□□□ 0.39
TTC3-219ENST00000485402 GTF2F1P35269 517 aaKnown RBP eCLIP17.5■□□□□ 0.395e-13■■■■□ 20.3
TTC3-219ENST00000485402 N4BP2Q86UW6 1770 aaPredicted RBP17.5■□□□□ 0.39
TTC3-219ENST00000485402 H7C1W4 665 aa17.5■□□□□ 0.39
TTC3-219ENST00000485402 AACSQ86V21 672 aa17.5■□□□□ 0.39
TTC3-219ENST00000485402 CBX8Q9HC52 389 aa17.5■□□□□ 0.39
TTC3-219ENST00000485402 TAOK2Q9UL54 1235 aa17.5■□□□□ 0.39
TTC3-219ENST00000485402 ARFGEF2Q9Y6D5 1785 aa17.5■□□□□ 0.39
TTC3-219ENST00000485402 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
TTC3-219ENST00000485402 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
TTC3-219ENST00000485402 MRVI1Q9Y6F6 885 aa17.49■□□□□ 0.39
TTC3-219ENST00000485402 A0A087WWV3 80 aa17.49■□□□□ 0.39
TTC3-219ENST00000485402 ISCA1Q9BUE6 129 aa17.49■□□□□ 0.39
TTC3-219ENST00000485402 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
TTC3-219ENST00000485402 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
TTC3-219ENST00000485402 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 ATRNO75882 1429 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 TPM3P06753 285 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 ZNF165P49910 485 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 CASP7P55210 303 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 FILIP1Q7Z7B0 1213 aa17.48■□□□□ 0.39
TTC3-219ENST00000485402 TRMT1Q9NXH9 659 aaKnown RBP17.48■□□□□ 0.39
TTC3-219ENST00000485402 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
TTC3-219ENST00000485402 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
TTC3-219ENST00000485402 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
TTC3-219ENST00000485402 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
TTC3-219ENST00000485402 VPS53Q5VIR6 699 aa17.47■□□□□ 0.39
TTC3-219ENST00000485402 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
TTC3-219ENST00000485402 FGD1P98174 961 aa17.47■□□□□ 0.39
TTC3-219ENST00000485402 CCDC112Q8NEF3 446 aa17.47■□□□□ 0.39
TTC3-219ENST00000485402 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
TTC3-219ENST00000485402 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
TTC3-219ENST00000485402 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.39
TTC3-219ENST00000485402 ARID5BQ14865 1188 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
TTC3-219ENST00000485402 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 FOXO4P98177 505 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 KRT27Q7Z3Y8 459 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 TAF6LQ9Y6J9 622 aa17.46■□□□□ 0.39
TTC3-219ENST00000485402 GOLGA6L19H0YKK7 550 aa17.46■□□□□ 0.38
TTC3-219ENST00000485402 NR1I2O75469 434 aa17.46■□□□□ 0.38
TTC3-219ENST00000485402 FSD1Q9BTV5 496 aa17.46■□□□□ 0.38
TTC3-219ENST00000485402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.38
TTC3-219ENST00000485402 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
TTC3-219ENST00000485402 H3BQV1 296 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 SASH1O94885 1247 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
TTC3-219ENST00000485402 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 ZSWIM6Q9HCJ5 1215 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 TRIM37O94972 964 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 NCBP1Q09161 790 aaKnown RBP17.45■□□□□ 0.38
TTC3-219ENST00000485402 UTP14CQ5TAP6 766 aaKnown RBP17.45■□□□□ 0.38
TTC3-219ENST00000485402 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
TTC3-219ENST00000485402 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
TTC3-219ENST00000485402 PTPN12Q05209 780 aaKnown RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
TTC3-219ENST00000485402 BICDL1Q6ZP65 573 aa17.44■□□□□ 0.38
TTC3-219ENST00000485402 CACTINQ8WUQ7 758 aaKnown RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 GTPBP4Q9BZE4 634 aaKnown RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 AOX1Q06278 1338 aa17.44■□□□□ 0.38
TTC3-219ENST00000485402 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 ERVV-1B6SEH8 477 aa17.44■□□□□ 0.38
TTC3-219ENST00000485402 GNPATO15228 680 aa17.44■□□□□ 0.38
TTC3-219ENST00000485402 JAK2O60674 1132 aa17.44■□□□□ 0.38
TTC3-219ENST00000485402 TRIM28Q13263 835 aaKnown RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
TTC3-219ENST00000485402 BECN2A8MW95 431 aa17.43■□□□□ 0.38
TTC3-219ENST00000485402 PCCAP05165 728 aaPredicted RBP17.43■□□□□ 0.38
TTC3-219ENST00000485402 ZNF75DP51815 510 aa17.43■□□□□ 0.38
TTC3-219ENST00000485402 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
TTC3-219ENST00000485402 NDUFB9Q9Y6M9 179 aa17.43■□□□□ 0.38
TTC3-219ENST00000485402 CGNQ9P2M7 1197 aaKnown RBP17.42■□□□□ 0.38
TTC3-219ENST00000485402 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
TTC3-219ENST00000485402 CCDC57Q2TAC2 916 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 CCDC144BQ3MJ40 725 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 ZNF772Q68DY9 489 aaPredicted RBP17.42■□□□□ 0.38
TTC3-219ENST00000485402 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 TJP1Q07157 1748 aa17.42■□□□□ 0.38
TTC3-219ENST00000485402 PDCP20941 246 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms