RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TBC1D10BQ4KMP7 808 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-209ENST00000484305 RSBN1LQ6PCB5 846 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-209ENST00000484305 USP17L1Q7RTZ2 530 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
HDAC1-209ENST00000484305 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 PGAP2Q9UHJ9 254 aa16.24■□□□□ 0.19
HDAC1-209ENST00000484305 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
HDAC1-209ENST00000484305 TMEM88BA6NKF7 163 aa16.23■□□□□ 0.19
HDAC1-209ENST00000484305 TRAF5O00463 557 aa16.23■□□□□ 0.19
HDAC1-209ENST00000484305 PLIN1O60240 522 aa16.23■□□□□ 0.19
HDAC1-209ENST00000484305 AGBL3Q8NEM8 1001 aa16.23■□□□□ 0.19
HDAC1-209ENST00000484305 GMLQ99445 158 aa16.23■□□□□ 0.19
HDAC1-209ENST00000484305 API5Q9BZZ5 524 aaKnown RBP16.23■□□□□ 0.19
HDAC1-209ENST00000484305 ZNF609O15014 1411 aa16.22■□□□□ 0.19
HDAC1-209ENST00000484305 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
HDAC1-209ENST00000484305 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
HDAC1-209ENST00000484305 JMYQ8N9B5 988 aa16.22■□□□□ 0.19
HDAC1-209ENST00000484305 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
HDAC1-209ENST00000484305 MXD3Q9BW11 206 aa16.22■□□□□ 0.19
HDAC1-209ENST00000484305 GLIS2Q9BZE0 524 aaPredicted RBP16.22■□□□□ 0.19
HDAC1-209ENST00000484305 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
HDAC1-209ENST00000484305 BCAR3O75815 825 aa16.21■□□□□ 0.19
HDAC1-209ENST00000484305 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
HDAC1-209ENST00000484305 C15orf52Q6ZUT6 534 aaKnown RBP16.21■□□□□ 0.19
HDAC1-209ENST00000484305 ARHGAP45Q92619 1136 aa16.21■□□□□ 0.19
HDAC1-209ENST00000484305 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
HDAC1-209ENST00000484305 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
HDAC1-209ENST00000484305 KIF4BQ2VIQ3 1234 aa16.2■□□□□ 0.18
HDAC1-209ENST00000484305 STRIP1Q5VSL9 837 aa16.2■□□□□ 0.18
HDAC1-209ENST00000484305 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
HDAC1-209ENST00000484305 CD209Q9NNX6 404 aa16.2■□□□□ 0.18
HDAC1-209ENST00000484305 RIPOR2Q9Y4F9 1068 aa16.2■□□□□ 0.18
HDAC1-209ENST00000484305 CNTNAP1P78357 1384 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 USP17L8P0C7I0 530 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
HDAC1-209ENST00000484305 ZNF280AP59817 542 aaPredicted RBP16.19■□□□□ 0.18
HDAC1-209ENST00000484305 LRRC24Q50LG9 513 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 CST9Q5W186 159 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 TTLL5Q6EMB2 1281 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
HDAC1-209ENST00000484305 TRIM27P14373 513 aa16.18■□□□□ 0.18
HDAC1-209ENST00000484305 GTF2IP78347 998 aa16.18■□□□□ 0.18
HDAC1-209ENST00000484305 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
HDAC1-209ENST00000484305 DLK2Q6UY11 383 aa16.18■□□□□ 0.18
HDAC1-209ENST00000484305 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
HDAC1-209ENST00000484305 USP48Q86UV5 1035 aa16.18■□□□□ 0.18
HDAC1-209ENST00000484305 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-209ENST00000484305 ASTN2O75129 1339 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-209ENST00000484305 MROH5Q6ZUA9 1318 aa16.18■□□□□ 0.18
HDAC1-209ENST00000484305 PCNTO95613 3336 aa16.17■□□□□ 0.18
HDAC1-209ENST00000484305 IPO8O15397 1037 aaKnown RBP16.17■□□□□ 0.18
HDAC1-209ENST00000484305 RFX5P48382 616 aaPredicted RBP16.17■□□□□ 0.18
HDAC1-209ENST00000484305 UBE4AQ14139 1066 aa16.17■□□□□ 0.18
HDAC1-209ENST00000484305 ZNF804AQ7Z570 1209 aa16.17■□□□□ 0.18
HDAC1-209ENST00000484305 MEIS3Q99687 375 aa16.17■□□□□ 0.18
HDAC1-209ENST00000484305 MYOZ2Q9NPC6 264 aa16.17■□□□□ 0.18
HDAC1-209ENST00000484305 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
HDAC1-209ENST00000484305 CELF2O95319 508 aaKnown RBP16.16■□□□□ 0.18
HDAC1-209ENST00000484305 IL1R1P14778 569 aa16.16■□□□□ 0.18
HDAC1-209ENST00000484305 SCARF1Q14162 830 aa16.16■□□□□ 0.18
HDAC1-209ENST00000484305 ATF7IPQ6VMQ6 1270 aa16.16■□□□□ 0.18
HDAC1-209ENST00000484305 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
HDAC1-209ENST00000484305 DCPSQ96C86 337 aaKnown RBP16.16■□□□□ 0.18
HDAC1-209ENST00000484305 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
HDAC1-209ENST00000484305 MYO3BQ8WXR4 1341 aa16.16■□□□□ 0.18
HDAC1-209ENST00000484305 RASSF10A6NK89 507 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 VEGFBP49765 207 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 PTPN12Q05209 780 aaKnown RBP16.15■□□□□ 0.18
HDAC1-209ENST00000484305 DEFB115Q30KQ5 88 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 METTL24Q5JXM2 366 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 VGLL2Q8N8G2 317 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 GGA3Q9NZ52 723 aa16.15■□□□□ 0.18
HDAC1-209ENST00000484305 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 PDE8BO95263 885 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 GYG1P46976 350 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 KIAA0825Q8IV33 1275 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 CERS5Q8N5B7 392 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 FAM84BQ96KN1 310 aaPredicted RBP16.14■□□□□ 0.17
HDAC1-209ENST00000484305 ZNF408Q9H9D4 720 aa16.14■□□□□ 0.17
HDAC1-209ENST00000484305 EYA2O00167 538 aa16.13■□□□□ 0.17
HDAC1-209ENST00000484305 NBPF9Q3BBW0 867 aa16.13■□□□□ 0.17
HDAC1-209ENST00000484305 ANGEL2Q5VTE6 544 aaKnown RBP16.13■□□□□ 0.17
HDAC1-209ENST00000484305 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
HDAC1-209ENST00000484305 JAG2Q9Y219 1238 aa16.13■□□□□ 0.17
HDAC1-209ENST00000484305 TLL2Q9Y6L7 1015 aa16.13■□□□□ 0.17
HDAC1-209ENST00000484305 SASH1O94885 1247 aa16.12■□□□□ 0.17
HDAC1-209ENST00000484305 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
HDAC1-209ENST00000484305 ATG9AQ7Z3C6 839 aa16.12■□□□□ 0.17
HDAC1-209ENST00000484305 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
HDAC1-209ENST00000484305 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
HDAC1-209ENST00000484305 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
HDAC1-209ENST00000484305 WNT10BO00744 389 aa16.11■□□□□ 0.17
HDAC1-209ENST00000484305 GNAI3P08754 354 aa16.11■□□□□ 0.17
HDAC1-209ENST00000484305 FBXO33Q7Z6M2 555 aa16.11■□□□□ 0.17
HDAC1-209ENST00000484305 SULF1Q8IWU6 871 aa16.11■□□□□ 0.17
HDAC1-209ENST00000484305 SIL1Q9H173 461 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms