RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
VARS-225ENST00000482996 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
VARS-225ENST00000482996 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
VARS-225ENST00000482996 PGAP2Q9UHJ9 254 aa17.43■□□□□ 0.38
VARS-225ENST00000482996 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
VARS-225ENST00000482996 ZNF609O15014 1411 aa17.42■□□□□ 0.38
VARS-225ENST00000482996 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
VARS-225ENST00000482996 PLIN1O60240 522 aa17.42■□□□□ 0.38
VARS-225ENST00000482996 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
VARS-225ENST00000482996 C15orf52Q6ZUT6 534 aaKnown RBP17.42■□□□□ 0.38
VARS-225ENST00000482996 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
VARS-225ENST00000482996 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
VARS-225ENST00000482996 KLRK1P26718 216 aa17.41■□□□□ 0.38
VARS-225ENST00000482996 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
VARS-225ENST00000482996 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
VARS-225ENST00000482996 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
VARS-225ENST00000482996 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
VARS-225ENST00000482996 SNAP23O00161 211 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
VARS-225ENST00000482996 DACT2Q5SW24 774 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 CDC37L1Q7L3B6 337 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 ZNF804AQ7Z570 1209 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 GMLQ99445 158 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
VARS-225ENST00000482996 ZBED9Q6R2W3 1325 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
VARS-225ENST00000482996 TRAF5O00463 557 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 DCPSQ96C86 337 aaKnown RBP17.39■□□□□ 0.37
VARS-225ENST00000482996 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.37
VARS-225ENST00000482996 CD209Q9NNX6 404 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 ABT1Q9ULW3 272 aaKnown RBP17.39■□□□□ 0.37
VARS-225ENST00000482996 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 PSME4Q14997 1843 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
VARS-225ENST00000482996 EGFRP00533 1210 aa17.38■□□□□ 0.37
VARS-225ENST00000482996 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
VARS-225ENST00000482996 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
VARS-225ENST00000482996 BCAR3O75815 825 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 MMP14P50281 582 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 GTF2IP78347 998 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 FMR1Q06787 632 aaKnown RBP eCLIP17.37■□□□□ 0.372e-8■■■■■ 30.7
VARS-225ENST00000482996 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
VARS-225ENST00000482996 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 KRT26Q7Z3Y9 468 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 USP48Q86UV5 1035 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 MYOZ2Q9NPC6 264 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
VARS-225ENST00000482996 CELF2O95319 508 aaKnown RBP17.36■□□□□ 0.37
VARS-225ENST00000482996 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
VARS-225ENST00000482996 LRRC24Q50LG9 513 aa17.36■□□□□ 0.37
VARS-225ENST00000482996 MXD3Q9BW11 206 aa17.36■□□□□ 0.37
VARS-225ENST00000482996 HDAC9Q9UKV0 1011 aa17.36■□□□□ 0.37
VARS-225ENST00000482996 RASSF10A6NK89 507 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 GNAI3P08754 354 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 TRIM27P14373 513 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 IL1R1P14778 569 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 SCARF1Q14162 830 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 CST9Q5W186 159 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 SULF1Q8IWU6 871 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 GGA3Q9NZ52 723 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
VARS-225ENST00000482996 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
VARS-225ENST00000482996 HIBADHP31937 336 aaKnown RBP17.34■□□□□ 0.37
VARS-225ENST00000482996 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
VARS-225ENST00000482996 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
VARS-225ENST00000482996 TRPM7Q96QT4 1865 aa17.34■□□□□ 0.37
VARS-225ENST00000482996 MEIS3Q99687 375 aa17.34■□□□□ 0.37
VARS-225ENST00000482996 PCNTO95613 3336 aa17.33■□□□□ 0.37
VARS-225ENST00000482996 EYA2O00167 538 aa17.33■□□□□ 0.36
VARS-225ENST00000482996 PDE8BO95263 885 aa17.33■□□□□ 0.36
VARS-225ENST00000482996 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
VARS-225ENST00000482996 VEGFBP49765 207 aa17.33■□□□□ 0.36
VARS-225ENST00000482996 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
VARS-225ENST00000482996 VPS37DQ86XT2 251 aa17.33■□□□□ 0.36
VARS-225ENST00000482996 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
VARS-225ENST00000482996 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
VARS-225ENST00000482996 GYG1P46976 350 aa17.32■□□□□ 0.36
VARS-225ENST00000482996 FKBP1AP62942 108 aaKnown RBP17.32■□□□□ 0.36
VARS-225ENST00000482996 PTPN12Q05209 780 aaKnown RBP17.32■□□□□ 0.36
VARS-225ENST00000482996 CAVIN4Q5BKX8 364 aa17.32■□□□□ 0.36
VARS-225ENST00000482996 ANGEL2Q5VTE6 544 aaKnown RBP17.32■□□□□ 0.36
VARS-225ENST00000482996 CLUAP1Q96AJ1 413 aa17.32■□□□□ 0.36
VARS-225ENST00000482996 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
VARS-225ENST00000482996 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
VARS-225ENST00000482996 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
VARS-225ENST00000482996 ADM5C9JUS6 153 aa17.31■□□□□ 0.36
VARS-225ENST00000482996 SASH1O94885 1247 aa17.31■□□□□ 0.36
VARS-225ENST00000482996 ECE1P42892 770 aa17.31■□□□□ 0.36
VARS-225ENST00000482996 PUM3Q15397 648 aaKnown RBP17.31■□□□□ 0.36
VARS-225ENST00000482996 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
VARS-225ENST00000482996 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
VARS-225ENST00000482996 FAM84BQ96KN1 310 aaPredicted RBP17.31■□□□□ 0.36
VARS-225ENST00000482996 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
VARS-225ENST00000482996 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
VARS-225ENST00000482996 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms