RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, human

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH3-208	ENST00000482460	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.7	■■■□□ 2.18
CYTH3-208	ENST00000482460	KCNJ4	P48050	445 aa		28.7	■■■□□ 2.18
CYTH3-208	ENST00000482460	KIF4B	Q2VIQ3	1234 aa		28.7	■■■□□ 2.18
CYTH3-208	ENST00000482460	SUCLG2	Q96I99	432 aa		28.7	■■■□□ 2.18
CYTH3-208	ENST00000482460	ZNF280A	P59817	542 aa	Predicted RBP	28.69	■■■□□ 2.18
CYTH3-208	ENST00000482460	CELF2	O95319	508 aa	Known RBP	28.68	■■■□□ 2.18
CYTH3-208	ENST00000482460	TAF7L	Q5H9L4	462 aa		28.68	■■■□□ 2.18
CYTH3-208	ENST00000482460	LDHAL6A	Q6ZMR3	332 aa		28.68	■■■□□ 2.18
CYTH3-208	ENST00000482460	USP48	Q86UV5	1035 aa		28.68	■■■□□ 2.18
CYTH3-208	ENST00000482460	KAZALD1	Q96I82	304 aa		28.68	■■■□□ 2.18
CYTH3-208	ENST00000482460	TLL2	Q9Y6L7	1015 aa		28.68	■■■□□ 2.18
CYTH3-208	ENST00000482460	TAF5L	O75529	589 aa		28.67	■■■□□ 2.18
CYTH3-208	ENST00000482460	KLRK1	P26718	216 aa		28.67	■■■□□ 2.18
CYTH3-208	ENST00000482460	HELB	Q8NG08	1087 aa	Predicted RBP	28.67	■■■□□ 2.18
CYTH3-208	ENST00000482460	DCPS	Q96C86	337 aa	Known RBP	28.67	■■■□□ 2.18
CYTH3-208	ENST00000482460	ZNF594	Q96JF6	807 aa	Predicted RBP	28.67	■■■□□ 2.18
CYTH3-208	ENST00000482460	SMC4	Q9NTJ3	1288 aa		28.67	■■■□□ 2.18
CYTH3-208	ENST00000482460	USP17L8	P0C7I0	530 aa		28.66	■■■□□ 2.18
CYTH3-208	ENST00000482460	DACT2	Q5SW24	774 aa		28.66	■■■□□ 2.18
CYTH3-208	ENST00000482460	STRIP1	Q5VSL9	837 aa		28.66	■■■□□ 2.18
CYTH3-208	ENST00000482460	WDR33	Q9C0J8	1336 aa	Known RBP	28.66	■■■□□ 2.18
CYTH3-208	ENST00000482460	C15orf52	Q6ZUT6	534 aa	Known RBP	28.65	■■■□□ 2.18
CYTH3-208	ENST00000482460	KRT26	Q7Z3Y9	468 aa		28.65	■■■□□ 2.18
CYTH3-208	ENST00000482460		A0A1B0GUL6	1792 aa		28.65	■■■□□ 2.18
CYTH3-208	ENST00000482460	SNAP23	O00161	211 aa		28.64	■■■□□ 2.18
CYTH3-208	ENST00000482460	CNNM1	Q9NRU3	951 aa		28.64	■■■□□ 2.18
CYTH3-208	ENST00000482460	MYO3B	Q8WXR4	1341 aa		28.64	■■■□□ 2.17
CYTH3-208	ENST00000482460	TTLL5	Q6EMB2	1281 aa		28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	SAPCD2	Q86UD0	394 aa		28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	FBXW7	Q969H0	707 aa		28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	BICC1	Q9H694	974 aa	Known RBP	28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	ZNF408	Q9H9D4	720 aa		28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	MYOZ2	Q9NPC6	264 aa		28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	ZNF646	O15015	1829 aa	Predicted RBP	28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	IRS2	Q9Y4H2	1338 aa		28.63	■■■□□ 2.17
CYTH3-208	ENST00000482460	ECE1	P42892	770 aa		28.62	■■■□□ 2.17
CYTH3-208	ENST00000482460	SCARF1	Q14162	830 aa		28.62	■■■□□ 2.17
CYTH3-208	ENST00000482460	RABL6	Q3YEC7	729 aa	Predicted RBP	28.62	■■■□□ 2.17
CYTH3-208	ENST00000482460	USP44	Q9H0E7	712 aa		28.62	■■■□□ 2.17
CYTH3-208	ENST00000482460	CD209	Q9NNX6	404 aa		28.62	■■■□□ 2.17
CYTH3-208	ENST00000482460	BRPF1	P55201	1214 aa	Predicted RBP	28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	IFFO2	Q5TF58	517 aa		28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	DIEXF	Q68CQ4	756 aa	Known RBP	28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	CAPNS2	Q96L46	248 aa		28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	MXD3	Q9BW11	206 aa		28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	GGA3	Q9NZ52	723 aa		28.61	■■■□□ 2.17
CYTH3-208	ENST00000482460	PLIN1	O60240	522 aa		28.6	■■■□□ 2.17
CYTH3-208	ENST00000482460	MMP14	P50281	582 aa		28.6	■■■□□ 2.17
CYTH3-208	ENST00000482460	DLK2	Q6UY11	383 aa		28.6	■■■□□ 2.17
CYTH3-208	ENST00000482460	OGFOD1	Q8N543	542 aa		28.6	■■■□□ 2.17
CYTH3-208	ENST00000482460	HHIPL1	Q96JK4	782 aa		28.6	■■■□□ 2.17
CYTH3-208	ENST00000482460	GTF2I	P78347	998 aa		28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	COL13A1	Q5TAT6	717 aa	Predicted RBP	28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	CYP4F22	Q6NT55	531 aa		28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	SULF1	Q8IWU6	871 aa		28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	MIER1	Q8N108	512 aa		28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	ANKRD44	Q8N8A2	993 aa		28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	ASTN2	O75129	1339 aa	Predicted RBP	28.59	■■■□□ 2.17
CYTH3-208	ENST00000482460	ADM5	C9JUS6	153 aa		28.58	■■■□□ 2.17
CYTH3-208	ENST00000482460	ZNF804A	Q7Z570	1209 aa		28.58	■■■□□ 2.17
CYTH3-208	ENST00000482460	PUS3	Q9BZE2	481 aa	Known RBP	28.58	■■■□□ 2.17
CYTH3-208	ENST00000482460	WBP1L	Q9NX94	342 aa		28.58	■■■□□ 2.17
CYTH3-208	ENST00000482460	NOB1	Q9ULX3	412 aa	Known RBP	28.58	■■■□□ 2.17
CYTH3-208	ENST00000482460	ANGEL2	Q5VTE6	544 aa	Known RBP	28.57	■■■□□ 2.16
CYTH3-208	ENST00000482460	RIPOR2	Q9Y4F9	1068 aa		28.57	■■■□□ 2.16
CYTH3-208	ENST00000482460	IL1R1	P14778	569 aa		28.56	■■■□□ 2.16
CYTH3-208	ENST00000482460	UBE4A	Q14139	1066 aa		28.56	■■■□□ 2.16
CYTH3-208	ENST00000482460	AIDA	Q96BJ3	306 aa		28.56	■■■□□ 2.16
CYTH3-208	ENST00000482460	PITPNM2	Q9BZ72	1349 aa		28.55	■■■□□ 2.16
CYTH3-208	ENST00000482460	FOXN1	O15353	648 aa		28.55	■■■□□ 2.16
CYTH3-208	ENST00000482460	RARS	P54136	660 aa	Known RBP	28.55	■■■□□ 2.16
CYTH3-208	ENST00000482460	MAP2K1	Q02750	393 aa	Predicted RBP	28.55	■■■□□ 2.16
CYTH3-208	ENST00000482460	GRM1	Q13255	1194 aa		28.55	■■■□□ 2.16
CYTH3-208	ENST00000482460	API5	Q9BZZ5	524 aa	Known RBP	28.55	■■■□□ 2.16
CYTH3-208	ENST00000482460	MROH5	Q6ZUA9	1318 aa		28.54	■■■□□ 2.16
CYTH3-208	ENST00000482460	NBPF9	Q3BBW0	867 aa		28.53	■■■□□ 2.16
CYTH3-208	ENST00000482460	KIAA0825	Q8IV33	1275 aa		28.53	■■■□□ 2.16
CYTH3-208	ENST00000482460	C2orf69	Q8N8R5	385 aa		28.53	■■■□□ 2.16
CYTH3-208	ENST00000482460	GBA2	Q9HCG7	927 aa	Predicted RBP	28.53	■■■□□ 2.16
CYTH3-208	ENST00000482460	HDAC9	Q9UKV0	1011 aa		28.53	■■■□□ 2.16
CYTH3-208	ENST00000482460	THSD7B	Q9C0I4	1608 aa		28.52	■■■□□ 2.16
CYTH3-208	ENST00000482460	MAP2K2	P36507	400 aa		28.52	■■■□□ 2.16
CYTH3-208	ENST00000482460	HUNK	P57058	714 aa		28.52	■■■□□ 2.16
CYTH3-208	ENST00000482460	WNT10B	O00744	389 aa		28.51	■■■□□ 2.15
CYTH3-208	ENST00000482460	LRRC24	Q50LG9	513 aa		28.51	■■■□□ 2.15
CYTH3-208	ENST00000482460	CDCA5	Q96FF9	252 aa		28.51	■■■□□ 2.15
CYTH3-208	ENST00000482460	CTCF	P49711	727 aa	Predicted RBP	28.5	■■■□□ 2.15
CYTH3-208	ENST00000482460	AOC2	O75106	756 aa		28.49	■■■□□ 2.15
CYTH3-208	ENST00000482460	FKBP1A	P62942	108 aa	Known RBP	28.49	■■■□□ 2.15
CYTH3-208	ENST00000482460	CERS5	Q8N5B7	392 aa		28.49	■■■□□ 2.15
CYTH3-208	ENST00000482460	ARHGAP45	Q92619	1136 aa		28.49	■■■□□ 2.15
CYTH3-208	ENST00000482460	KIF16B	Q96L93	1317 aa		28.48	■■■□□ 2.15
CYTH3-208	ENST00000482460	SASH1	O94885	1247 aa		28.48	■■■□□ 2.15
CYTH3-208	ENST00000482460	UBTFL1	P0CB47	393 aa	Predicted RBP	28.48	■■■□□ 2.15
CYTH3-208	ENST00000482460	HIBADH	P31937	336 aa	Known RBP	28.48	■■■□□ 2.15
CYTH3-208	ENST00000482460	METTL24	Q5JXM2	366 aa		28.48	■■■□□ 2.15
CYTH3-208	ENST00000482460	FAM84B	Q96KN1	310 aa	Predicted RBP	28.48	■■■□□ 2.15
CYTH3-208	ENST00000482460	GYG1	P46976	350 aa		28.47	■■■□□ 2.15
CYTH3-208	ENST00000482460	TDRD7	Q8NHU6	1098 aa	Known RBP	28.47	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms