RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ERLIN1O75477 346 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 ZNF24P17028 368 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 RANBP1P43487 201 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 CAPRIN2Q6IMN6 1127 aaKnown RBP11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 AFAP1L1Q8TED9 768 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 RMDN2Q96LZ7 410 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 CORO1CQ9ULV4 474 aaPredicted RBP11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 FERP16591 822 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 TXLNAP40222 546 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 TSNAXIP1Q2TAA8 658 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 FOXD4L5Q5VV16 416 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 E4F1Q66K89 784 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 MICALCLQ6ZW33 695 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 OGFOD1Q8N543 542 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 FOXD4L4Q8WXT5 416 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 CARD6Q9BX69 1037 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 FAM204AQ9H8W3 233 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 ENO4A6NNW6 628 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 PPFIA3O75145 1194 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 MIS18BP1Q6P0N0 1132 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 B4GALNT4Q76KP1 1039 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 GCC1Q96CN9 775 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 RAB21Q9UL25 225 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 ATP10BO94823 1461 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 ADGRL2O95490 1459 aa11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 MAGI1Q96QZ7 1491 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-206ENST00000481109 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 MYO1FO00160 1098 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SMAPO00193 183 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SYT1P21579 422 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SNCBQ16143 134 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 L1RE1Q9UN81 338 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 TTC21BQ7Z4L5 1316 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SASH1O94885 1247 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 TUBBP07437 444 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 CCT5P48643 541 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 LRRC23Q53EV4 343 aaPredicted RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SFMBT2Q5VUG0 894 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 RBM43Q6ZSC3 357 aaKnown RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 TAX1BP1Q86VP1 789 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 NME8Q8N427 588 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 GOLGA1Q92805 767 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 CCDC114Q96M63 670 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 POLR3AO14802 1390 aaPredicted RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 YTHDC2Q9H6S0 1430 aaKnown RBP11.85□□□□□ -0.51
PRPF4B-206ENST00000481109 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 ZEB2O60315 1214 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 GJA8P48165 433 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.519e-6■□□□□ 8.7
PRPF4B-206ENST00000481109 SMCR8Q8TEV9 937 aaPredicted RBP11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 HDAC7Q8WUI4 952 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 RBM41Q96IZ5 413 aaKnown RBP11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 MPHOSPH8Q99549 860 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 UNC45AQ9H3U1 944 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 PLEKHA4Q9H4M7 779 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 VIPAS39Q9H9C1 493 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 TRPV5Q9NQA5 729 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 SMNDC1O75940 238 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■□□□□ 10.5
PRPF4B-206ENST00000481109 KIAA0754O94854 1291 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 GBP3Q9H0R5 595 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 C9orf84Q5VXU9 1444 aa11.84□□□□□ -0.51
PRPF4B-206ENST00000481109 ADGBQ8N7X0 1667 aa11.83□□□□□ -0.51
PRPF4B-206ENST00000481109 ITSN2Q9NZM3 1697 aa11.83□□□□□ -0.51
PRPF4B-206ENST00000481109 A6NNZ2 444 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 USP4Q13107 963 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 DRP2Q13474 957 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 KIF4BQ2VIQ3 1234 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 TUBB8Q3ZCM7 444 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms