RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 PDE3AQ14432 1141 aa23.48■■□□□ 1.35
AGRN-208ENST00000479707 FBXW7Q969H0 707 aa23.48■■□□□ 1.35
AGRN-208ENST00000479707 COA1Q9GZY4 146 aa23.48■■□□□ 1.35
AGRN-208ENST00000479707 COPRSQ9NQ92 184 aa23.48■■□□□ 1.35
AGRN-208ENST00000479707 DDX19BQ9UMR2 479 aa23.48■■□□□ 1.35
AGRN-208ENST00000479707 PDE8BO95263 885 aa23.47■■□□□ 1.35
AGRN-208ENST00000479707 LMOD1P29536 600 aaPredicted RBP23.47■■□□□ 1.35
AGRN-208ENST00000479707 EPS15P42566 896 aa23.47■■□□□ 1.35
AGRN-208ENST00000479707 SCNN1DP51172 638 aa23.47■■□□□ 1.35
AGRN-208ENST00000479707 ATP8B2P98198 1209 aa23.47■■□□□ 1.35
AGRN-208ENST00000479707 PODNQ7Z5L7 613 aa23.47■■□□□ 1.35
AGRN-208ENST00000479707 IRS2Q9Y4H2 1338 aa23.47■■□□□ 1.35
AGRN-208ENST00000479707 CIAO1O76071 339 aa23.46■■□□□ 1.35
AGRN-208ENST00000479707 TOMM70O94826 608 aa23.46■■□□□ 1.35
AGRN-208ENST00000479707 EPHX2P34913 555 aa23.46■■□□□ 1.35
AGRN-208ENST00000479707 VGLL2Q8N8G2 317 aa23.46■■□□□ 1.35
AGRN-208ENST00000479707 TAF1DQ9H5J8 278 aaPredicted RBP23.46■■□□□ 1.35
AGRN-208ENST00000479707 GYG1P46976 350 aa23.45■■□□□ 1.34
AGRN-208ENST00000479707 C1QTNF8P60827 252 aa23.45■■□□□ 1.34
AGRN-208ENST00000479707 EAPPQ56P03 285 aaPredicted RBP23.45■■□□□ 1.34
AGRN-208ENST00000479707 C15orf52Q6ZUT6 534 aaKnown RBP23.45■■□□□ 1.34
AGRN-208ENST00000479707 CD209Q9NNX6 404 aa23.45■■□□□ 1.34
AGRN-208ENST00000479707 CEP126Q9P2H0 1117 aa23.45■■□□□ 1.34
AGRN-208ENST00000479707 FBXO3Q9UK99 471 aa23.45■■□□□ 1.34
AGRN-208ENST00000479707 POTEIP0CG38 1075 aa23.44■■□□□ 1.34
AGRN-208ENST00000479707 POTEJP0CG39 1038 aa23.44■■□□□ 1.34
AGRN-208ENST00000479707 IL15P40933 162 aaPredicted RBP23.44■■□□□ 1.34
AGRN-208ENST00000479707 RRP1P56182 461 aaKnown RBP23.44■■□□□ 1.34
AGRN-208ENST00000479707 ZNF804AQ7Z570 1209 aa23.44■■□□□ 1.34
AGRN-208ENST00000479707 GPRC5DQ9NZD1 345 aa23.44■■□□□ 1.34
AGRN-208ENST00000479707 SHTN1A0MZ66 631 aa23.43■■□□□ 1.34
AGRN-208ENST00000479707 USP17L3A6NCW0 530 aa23.43■■□□□ 1.34
AGRN-208ENST00000479707 USP17L4A6NCW7 530 aa23.43■■□□□ 1.34
AGRN-208ENST00000479707 VIL1P09327 827 aaKnown RBP23.43■■□□□ 1.34
AGRN-208ENST00000479707 USP17L1Q7RTZ2 530 aa23.43■■□□□ 1.34
AGRN-208ENST00000479707 MXD3Q9BW11 206 aa23.43■■□□□ 1.34
AGRN-208ENST00000479707 CNOT7Q9UIV1 285 aaKnown RBP23.43■■□□□ 1.34
AGRN-208ENST00000479707 POLA2Q14181 598 aa23.42■■□□□ 1.34
AGRN-208ENST00000479707 PUM3Q15397 648 aaKnown RBP23.42■■□□□ 1.34
AGRN-208ENST00000479707 CEP85Q6P2H3 762 aa23.42■■□□□ 1.34
AGRN-208ENST00000479707 FAM84BQ96KN1 310 aaPredicted RBP23.42■■□□□ 1.34
AGRN-208ENST00000479707 ZBTB40Q9NUA8 1239 aa23.42■■□□□ 1.34
AGRN-208ENST00000479707 PSME4Q14997 1843 aa23.42■■□□□ 1.34
AGRN-208ENST00000479707 HIBADHP31937 336 aaKnown RBP23.41■■□□□ 1.34
AGRN-208ENST00000479707 GTF2IP78347 998 aa23.41■■□□□ 1.34
AGRN-208ENST00000479707 G3BP1Q13283 466 aaKnown RBP eCLIP23.41■■□□□ 1.34
AGRN-208ENST00000479707 TTLL5Q6EMB2 1281 aa23.41■■□□□ 1.34
AGRN-208ENST00000479707 RSBN1LQ6PCB5 846 aaPredicted RBP23.41■■□□□ 1.34
AGRN-208ENST00000479707 RBM46Q8TBY0 533 aaKnown RBP23.41■■□□□ 1.34
AGRN-208ENST00000479707 SSH3Q8TE77 659 aa23.41■■□□□ 1.34
AGRN-208ENST00000479707 CLEC11AQ9Y240 323 aa23.41■■□□□ 1.34
AGRN-208ENST00000479707 IFIT1P09914 478 aaKnown RBP23.4■■□□□ 1.34
AGRN-208ENST00000479707 FGFR2P21802 821 aa23.4■■□□□ 1.34
AGRN-208ENST00000479707 TFCP2Q12800 502 aa23.4■■□□□ 1.34
AGRN-208ENST00000479707 VPS37DQ86XT2 251 aa23.4■■□□□ 1.34
AGRN-208ENST00000479707 MICALL2Q8IY33 904 aa23.4■■□□□ 1.34
AGRN-208ENST00000479707 CHMP4BQ9H444 224 aaKnown RBP23.4■■□□□ 1.34
AGRN-208ENST00000479707 JAG2Q9Y219 1238 aa23.4■■□□□ 1.34
AGRN-208ENST00000479707 SURF6O75683 361 aaKnown RBP23.39■■□□□ 1.33
AGRN-208ENST00000479707 SLC5A1P13866 664 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 IL1R1P14778 569 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 BCAMP50895 628 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 ATP2B3Q16720 1220 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 CAVIN4Q5BKX8 364 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 LPIN2Q92539 896 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 DPF2Q92785 391 aa23.39■■□□□ 1.33
AGRN-208ENST00000479707 IQSEC3Q9UPP2 1182 aaPredicted RBP23.39■■□□□ 1.33
AGRN-208ENST00000479707 H7C1D1 291 aa23.38■■□□□ 1.33
AGRN-208ENST00000479707 RPS12P25398 132 aaKnown RBP23.38■■□□□ 1.33
AGRN-208ENST00000479707 OS9Q13438 667 aaPredicted RBP23.38■■□□□ 1.33
AGRN-208ENST00000479707 DACT2Q5SW24 774 aa23.38■■□□□ 1.33
AGRN-208ENST00000479707 RBM26Q5T8P6 1007 aaKnown RBP23.38■■□□□ 1.33
AGRN-208ENST00000479707 STRIP1Q5VSL9 837 aa23.38■■□□□ 1.33
AGRN-208ENST00000479707 PNMA8AQ86V59 439 aaPredicted RBP23.38■■□□□ 1.33
AGRN-208ENST00000479707 SMC1BQ8NDV3 1235 aa23.38■■□□□ 1.33
AGRN-208ENST00000479707 ADARB2Q9NS39 739 aaKnown RBP23.38■■□□□ 1.33
AGRN-208ENST00000479707 SAMD7Q7Z3H4 446 aa23.37■■□□□ 1.33
AGRN-208ENST00000479707 FBXO33Q7Z6M2 555 aa23.37■■□□□ 1.33
AGRN-208ENST00000479707 AGBL3Q8NEM8 1001 aa23.37■■□□□ 1.33
AGRN-208ENST00000479707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.37■■□□□ 1.33
AGRN-208ENST00000479707 TIMM10P62072 90 aa23.36■■□□□ 1.33
AGRN-208ENST00000479707 USP50Q70EL3 339 aaPredicted RBP23.36■■□□□ 1.33
AGRN-208ENST00000479707 TDRD7Q8NHU6 1098 aaKnown RBP23.36■■□□□ 1.33
AGRN-208ENST00000479707 ZNF646O15015 1829 aaPredicted RBP23.36■■□□□ 1.33
AGRN-208ENST00000479707 FRAT2O75474 233 aaPredicted RBP23.35■■□□□ 1.33
AGRN-208ENST00000479707 SASH1O94885 1247 aa23.35■■□□□ 1.33
AGRN-208ENST00000479707 TBC1D10BQ4KMP7 808 aaPredicted RBP23.35■■□□□ 1.33
AGRN-208ENST00000479707 CHADLQ6NUI6 762 aa23.35■■□□□ 1.33
AGRN-208ENST00000479707 LDHDQ86WU2 507 aa23.35■■□□□ 1.33
AGRN-208ENST00000479707 RPAP2Q8IXW5 612 aaPredicted RBP23.35■■□□□ 1.33
AGRN-208ENST00000479707 TRPM4Q8TD43 1214 aa23.35■■□□□ 1.33
AGRN-208ENST00000479707 GMLQ99445 158 aa23.35■■□□□ 1.33
AGRN-208ENST00000479707 FSTL1Q12841 308 aa23.34■■□□□ 1.33
AGRN-208ENST00000479707 NEUROD6Q96NK8 337 aa23.34■■□□□ 1.33
AGRN-208ENST00000479707 EGFRP00533 1210 aa23.33■■□□□ 1.33
AGRN-208ENST00000479707 USP17L8P0C7I0 530 aa23.33■■□□□ 1.33
AGRN-208ENST00000479707 ADORA1P30542 326 aa23.33■■□□□ 1.33
AGRN-208ENST00000479707 HIRAP54198 1017 aaPredicted RBP23.33■■□□□ 1.33
AGRN-208ENST00000479707 CHAF1AQ13111 956 aaPredicted RBP23.33■■□□□ 1.33
AGRN-208ENST00000479707 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms