RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	SNAP23	O00161	211 aa		19.02	■□□□□ 0.64
CCNL1-222	ENST00000479596	KIF4B	Q2VIQ3	1234 aa		19.02	■□□□□ 0.64
CCNL1-222	ENST00000479596	USP17L1	Q7RTZ2	530 aa		19.02	■□□□□ 0.64
CCNL1-222	ENST00000479596	ZNF594	Q96JF6	807 aa	Predicted RBP	19.02	■□□□□ 0.64
CCNL1-222	ENST00000479596	ABT1	Q9ULW3	272 aa	Known RBP	19.02	■□□□□ 0.64
CCNL1-222	ENST00000479596	TAF5L	O75529	589 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	DEFB115	Q30KQ5	88 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	DACT2	Q5SW24	774 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	RBM26	Q5T8P6	1007 aa	Known RBP	19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	CDC37L1	Q7L3B6	337 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	MXD3	Q9BW11	206 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	COA1	Q9GZY4	146 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	TLL2	Q9Y6L7	1015 aa		19.01	■□□□□ 0.63
CCNL1-222	ENST00000479596	ASTN2	O75129	1339 aa	Predicted RBP	19	■□□□□ 0.63
CCNL1-222	ENST00000479596	THSD7B	Q9C0I4	1608 aa		19	■□□□□ 0.63
CCNL1-222	ENST00000479596	CELF2	O95319	508 aa	Known RBP	19	■□□□□ 0.63
CCNL1-222	ENST00000479596	USP48	Q86UV5	1035 aa		19	■□□□□ 0.63
CCNL1-222	ENST00000479596	HELB	Q8NG08	1087 aa	Predicted RBP	19	■□□□□ 0.63
CCNL1-222	ENST00000479596	CCDC57	Q2TAC2	916 aa		18.99	■□□□□ 0.63
CCNL1-222	ENST00000479596	RABL6	Q3YEC7	729 aa	Predicted RBP	18.99	■□□□□ 0.63
CCNL1-222	ENST00000479596	ANKRD44	Q8N8A2	993 aa		18.99	■□□□□ 0.63
CCNL1-222	ENST00000479596	SMC4	Q9NTJ3	1288 aa		18.99	■□□□□ 0.63
CCNL1-222	ENST00000479596	WDR33	Q9C0J8	1336 aa	Known RBP	18.99	■□□□□ 0.63
CCNL1-222	ENST00000479596	ADM5	C9JUS6	153 aa		18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	CT47B1	P0C2W7	299 aa	Predicted RBP	18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	USP17L8	P0C7I0	530 aa		18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	STRIP1	Q5VSL9	837 aa		18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	C15orf52	Q6ZUT6	534 aa	Known RBP	18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	SAPCD2	Q86UD0	394 aa		18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	BICC1	Q9H694	974 aa	Known RBP	18.98	■□□□□ 0.63
CCNL1-222	ENST00000479596	KCNJ4	P48050	445 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	LDHAL6A	Q6ZMR3	332 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	KRT26	Q7Z3Y9	468 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	MIER1	Q8N108	512 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	USP44	Q9H0E7	712 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	MYOZ2	Q9NPC6	264 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	GGA3	Q9NZ52	723 aa		18.97	■□□□□ 0.63
CCNL1-222	ENST00000479596	IFFO2	Q5TF58	517 aa		18.96	■□□□□ 0.63
CCNL1-222	ENST00000479596	CYP4F22	Q6NT55	531 aa		18.96	■□□□□ 0.63
CCNL1-222	ENST00000479596	CAPNS2	Q96L46	248 aa		18.96	■□□□□ 0.63
CCNL1-222	ENST00000479596	PUS3	Q9BZE2	481 aa	Known RBP	18.96	■□□□□ 0.63
CCNL1-222	ENST00000479596	ZNF408	Q9H9D4	720 aa		18.96	■□□□□ 0.63
CCNL1-222	ENST00000479596	CD209	Q9NNX6	404 aa		18.96	■□□□□ 0.63
CCNL1-222	ENST00000479596	BRPF1	P55201	1214 aa	Predicted RBP	18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	SCARF1	Q14162	830 aa		18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	TAF7L	Q5H9L4	462 aa		18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	FBXW7	Q969H0	707 aa		18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	DCPS	Q96C86	337 aa	Known RBP	18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	CNNM1	Q9NRU3	951 aa		18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	MYO3B	Q8WXR4	1341 aa		18.95	■□□□□ 0.62
CCNL1-222	ENST00000479596	POLR2A	P24928	1970 aa	Known RBP	18.94	■□□□□ 0.62
CCNL1-222	ENST00000479596	FOXN1	O15353	648 aa		18.94	■□□□□ 0.62
CCNL1-222	ENST00000479596	ANGEL2	Q5VTE6	544 aa	Known RBP	18.94	■□□□□ 0.62
CCNL1-222	ENST00000479596	TTLL5	Q6EMB2	1281 aa		18.94	■□□□□ 0.62
CCNL1-222	ENST00000479596	WBP1L	Q9NX94	342 aa		18.94	■□□□□ 0.62
CCNL1-222	ENST00000479596	NOB1	Q9ULX3	412 aa	Known RBP	18.94	■□□□□ 0.62
CCNL1-222	ENST00000479596	RARS	P54136	660 aa	Known RBP	18.93	■□□□□ 0.62
CCNL1-222	ENST00000479596	GTF2I	P78347	998 aa		18.93	■□□□□ 0.62
CCNL1-222	ENST00000479596	DIEXF	Q68CQ4	756 aa	Known RBP	18.93	■□□□□ 0.62
CCNL1-222	ENST00000479596	HHIPL1	Q96JK4	782 aa		18.93	■□□□□ 0.62
CCNL1-222	ENST00000479596	RIPOR2	Q9Y4F9	1068 aa		18.93	■□□□□ 0.62
CCNL1-222	ENST00000479596	PLIN1	O60240	522 aa		18.92	■□□□□ 0.62
CCNL1-222	ENST00000479596	IL1R1	P14778	569 aa		18.92	■□□□□ 0.62
CCNL1-222	ENST00000479596	NBPF9	Q3BBW0	867 aa		18.92	■□□□□ 0.62
CCNL1-222	ENST00000479596	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.92	■□□□□ 0.62
CCNL1-222	ENST00000479596	CERS5	Q8N5B7	392 aa		18.92	■□□□□ 0.62
CCNL1-222	ENST00000479596	ECE1	P42892	770 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	GRM1	Q13255	1194 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	LRRC24	Q50LG9	513 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	ZNF804A	Q7Z570	1209 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	KIAA0825	Q8IV33	1275 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	SULF1	Q8IWU6	871 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	KLHDC4	Q8TBB5	520 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	CDCA5	Q96FF9	252 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	SCAF8	Q9UPN6	1271 aa	Known RBP	18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	PITPNM2	Q9BZ72	1349 aa		18.91	■□□□□ 0.62
CCNL1-222	ENST00000479596	WNT10B	O00744	389 aa		18.9	■□□□□ 0.62
CCNL1-222	ENST00000479596	AOC2	O75106	756 aa		18.9	■□□□□ 0.62
CCNL1-222	ENST00000479596	UBE4A	Q14139	1066 aa		18.9	■□□□□ 0.62
CCNL1-222	ENST00000479596	ZBED3	Q96IU2	234 aa	Predicted RBP	18.9	■□□□□ 0.62
CCNL1-222	ENST00000479596	SASH1	O94885	1247 aa		18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	RFX5	P48382	616 aa	Predicted RBP	18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	HUNK	P57058	714 aa		18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	OGFOD1	Q8N543	542 aa		18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	VGLL2	Q8N8G2	317 aa		18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	GBA2	Q9HCG7	927 aa	Predicted RBP	18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	MROH5	Q6ZUA9	1318 aa		18.89	■□□□□ 0.61
CCNL1-222	ENST00000479596	MMP14	P50281	582 aa		18.88	■□□□□ 0.61
CCNL1-222	ENST00000479596	API5	Q9BZZ5	524 aa	Known RBP	18.88	■□□□□ 0.61
CCNL1-222	ENST00000479596	JAG2	Q9Y219	1238 aa		18.88	■□□□□ 0.61
CCNL1-222	ENST00000479596	GYG1	P46976	350 aa		18.87	■□□□□ 0.61
CCNL1-222	ENST00000479596	MAP2K1	Q02750	393 aa	Predicted RBP	18.87	■□□□□ 0.61
CCNL1-222	ENST00000479596	AIDA	Q96BJ3	306 aa		18.87	■□□□□ 0.61
CCNL1-222	ENST00000479596	FAM84B	Q96KN1	310 aa	Predicted RBP	18.87	■□□□□ 0.61
CCNL1-222	ENST00000479596	FAM205A	Q6ZU69	1335 aa		18.86	■□□□□ 0.61
CCNL1-222	ENST00000479596	MAP2K2	P36507	400 aa		18.86	■□□□□ 0.61
CCNL1-222	ENST00000479596	CTCF	P49711	727 aa	Predicted RBP	18.86	■□□□□ 0.61
CCNL1-222	ENST00000479596	FKBP1A	P62942	108 aa	Known RBP	18.86	■□□□□ 0.61
CCNL1-222	ENST00000479596	TDRD7	Q8NHU6	1098 aa	Known RBP	18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 707.3 ms