RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
COL16A1-211ENST00000479100 DUOX1Q9NRD9 1551 aa18.88■□□□□ 0.61
COL16A1-211ENST00000479100 COL4A5P29400 1685 aa18.88■□□□□ 0.61
COL16A1-211ENST00000479100 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
COL16A1-211ENST00000479100 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
COL16A1-211ENST00000479100 OS9Q13438 667 aaPredicted RBP18.87■□□□□ 0.61
COL16A1-211ENST00000479100 POLA2Q14181 598 aa18.87■□□□□ 0.61
COL16A1-211ENST00000479100 DOK7Q18PE1 504 aa18.87■□□□□ 0.61
COL16A1-211ENST00000479100 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
COL16A1-211ENST00000479100 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
COL16A1-211ENST00000479100 RPAP2Q8IXW5 612 aaPredicted RBP18.87■□□□□ 0.61
COL16A1-211ENST00000479100 VPS33BQ9H267 617 aa18.87■□□□□ 0.61
COL16A1-211ENST00000479100 FBXO3Q9UK99 471 aa18.87■□□□□ 0.61
COL16A1-211ENST00000479100 PASKQ96RG2 1323 aa18.86■□□□□ 0.61
COL16A1-211ENST00000479100 SURF6O75683 361 aaKnown RBP18.86■□□□□ 0.61
COL16A1-211ENST00000479100 CIAO1O76071 339 aa18.86■□□□□ 0.61
COL16A1-211ENST00000479100 IL15P40933 162 aaPredicted RBP18.86■□□□□ 0.61
COL16A1-211ENST00000479100 GPC2Q8N158 579 aa18.86■□□□□ 0.61
COL16A1-211ENST00000479100 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
COL16A1-211ENST00000479100 HMMRO75330 724 aa18.85■□□□□ 0.61
COL16A1-211ENST00000479100 PDE8BO95263 885 aa18.85■□□□□ 0.61
COL16A1-211ENST00000479100 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
COL16A1-211ENST00000479100 DBNDD1Q9H9R9 158 aa18.85■□□□□ 0.61
COL16A1-211ENST00000479100 HACL1Q9UJ83 578 aa18.85■□□□□ 0.61
COL16A1-211ENST00000479100 LTBP1Q14766 1721 aa18.84■□□□□ 0.61
COL16A1-211ENST00000479100 ITGBL1O95965 494 aaPredicted RBP18.84■□□□□ 0.61
COL16A1-211ENST00000479100 EPHX2P34913 555 aa18.84■□□□□ 0.61
COL16A1-211ENST00000479100 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
COL16A1-211ENST00000479100 KLRK1P26718 216 aa18.83■□□□□ 0.6
COL16A1-211ENST00000479100 EIF6P56537 245 aaKnown RBP18.83■□□□□ 0.6
COL16A1-211ENST00000479100 TFCP2Q12800 502 aa18.83■□□□□ 0.6
COL16A1-211ENST00000479100 UBE4AQ14139 1066 aa18.83■□□□□ 0.6
COL16A1-211ENST00000479100 TXNRD3Q86VQ6 643 aa18.83■□□□□ 0.6
COL16A1-211ENST00000479100 SIRT2Q8IXJ6 389 aa18.83■□□□□ 0.6
COL16A1-211ENST00000479100 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.6
COL16A1-211ENST00000479100 MED23Q9ULK4 1368 aa18.82■□□□□ 0.6
COL16A1-211ENST00000479100 ECE2O60344 883 aa18.82■□□□□ 0.6
COL16A1-211ENST00000479100 PUM3Q15397 648 aaKnown RBP18.82■□□□□ 0.6
COL16A1-211ENST00000479100 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
COL16A1-211ENST00000479100 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
COL16A1-211ENST00000479100 SCNN1DP51172 638 aa18.81■□□□□ 0.6
COL16A1-211ENST00000479100 ATP2B3Q16720 1220 aa18.81■□□□□ 0.6
COL16A1-211ENST00000479100 PNMA8AQ86V59 439 aaPredicted RBP18.81■□□□□ 0.6
COL16A1-211ENST00000479100 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
COL16A1-211ENST00000479100 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
COL16A1-211ENST00000479100 SCN4AP35499 1836 aa18.8■□□□□ 0.6
COL16A1-211ENST00000479100 APBB1O00213 710 aa18.8■□□□□ 0.6
COL16A1-211ENST00000479100 RAD17O75943 681 aa18.8■□□□□ 0.6
COL16A1-211ENST00000479100 IFIT1P09914 478 aaKnown RBP18.8■□□□□ 0.6
COL16A1-211ENST00000479100 SLC5A1P13866 664 aa18.8■□□□□ 0.6
COL16A1-211ENST00000479100 EAPPQ56P03 285 aaPredicted RBP18.8■□□□□ 0.6
COL16A1-211ENST00000479100 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
COL16A1-211ENST00000479100 SASH1O94885 1247 aa18.79■□□□□ 0.6
COL16A1-211ENST00000479100 GYG1P46976 350 aa18.79■□□□□ 0.6
COL16A1-211ENST00000479100 ZNF804AQ7Z570 1209 aa18.79■□□□□ 0.6
COL16A1-211ENST00000479100 FBXW7Q969H0 707 aa18.79■□□□□ 0.6
COL16A1-211ENST00000479100 COA1Q9GZY4 146 aa18.79■□□□□ 0.6
COL16A1-211ENST00000479100 A0A1B0GUL6 1792 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 ADAMTSL1Q8N6G6 1762 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 YDJCA8MPS7 323 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 FGFR2P21802 821 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 CXCL9Q07325 125 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 HSP90AB4PQ58FF6 505 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 C15orf52Q6ZUT6 534 aaKnown RBP18.78■□□□□ 0.6
COL16A1-211ENST00000479100 VPS37DQ86XT2 251 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 LPIN2Q92539 896 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 KCNQ5Q9NR82 932 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
COL16A1-211ENST00000479100 HIBADHP31937 336 aaKnown RBP18.77■□□□□ 0.6
COL16A1-211ENST00000479100 EPS15P42566 896 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 TIMM10P62072 90 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 AAMPQ13685 434 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 TNIP1Q15025 636 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 CAVIN4Q5BKX8 364 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 MAP1SQ66K74 1059 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-211ENST00000479100 PODNQ7Z5L7 613 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 CNTROBQ8N137 903 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 FAM84BQ96KN1 310 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-211ENST00000479100 NEUROD6Q96NK8 337 aa18.77■□□□□ 0.6
COL16A1-211ENST00000479100 IRS2Q9Y4H2 1338 aa18.76■□□□□ 0.59
COL16A1-211ENST00000479100 COL13A1Q5TAT6 717 aaPredicted RBP18.76■□□□□ 0.59
COL16A1-211ENST00000479100 ERC1Q8IUD2 1116 aa18.76■□□□□ 0.59
COL16A1-211ENST00000479100 CD209Q9NNX6 404 aa18.76■□□□□ 0.59
COL16A1-211ENST00000479100 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
COL16A1-211ENST00000479100 CLEC11AQ9Y240 323 aa18.76■□□□□ 0.59
COL16A1-211ENST00000479100 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
COL16A1-211ENST00000479100 PSMD14O00487 310 aa18.75■□□□□ 0.59
COL16A1-211ENST00000479100 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
COL16A1-211ENST00000479100 HSPA1AP0DMV8 641 aaKnown RBP18.75■□□□□ 0.59
COL16A1-211ENST00000479100 HSPA1BP0DMV9 641 aaKnown RBP18.75■□□□□ 0.59
COL16A1-211ENST00000479100 BCAMP50895 628 aa18.75■□□□□ 0.59
COL16A1-211ENST00000479100 CNTNAP1P78357 1384 aa18.75■□□□□ 0.59
COL16A1-211ENST00000479100 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 TMEM88BA6NKF7 163 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 ADORA1P30542 326 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 GORABQ5T7V8 394 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms