RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 TRAF5O00463 557 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 BBOX1O75936 387 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 ZNF853P0CG23 659 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 GMPSP49915 693 aaPredicted RBP7.2□□□□□ -1.26
TRA2B-211ENST00000477939 CXCL9Q07325 125 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 MYBPC2Q14324 1141 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 DUSP27Q5VZP5 1158 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 CTR9Q6PD62 1173 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 DPP8Q6V1X1 898 aaPredicted RBP7.2□□□□□ -1.26
TRA2B-211ENST00000477939 USP50Q70EL3 339 aaPredicted RBP7.2□□□□□ -1.26
TRA2B-211ENST00000477939 DDX46Q7L014 1031 aaKnown RBP7.2□□□□□ -1.26
TRA2B-211ENST00000477939 SP8Q8IXZ3 490 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 BANK1Q8NDB2 785 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 TSPAN18Q96SJ8 248 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 ISCA1Q9BUE6 129 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 VPS33BQ9H267 617 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 PRKRIP1Q9H875 184 aaPredicted RBP7.2□□□□□ -1.26
TRA2B-211ENST00000477939 MBIPQ9NS73 344 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 DBF4Q9UBU7 674 aaPredicted RBP7.2□□□□□ -1.26
TRA2B-211ENST00000477939 ZNRF3Q9ULT6 936 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 RIPOR2Q9Y4F9 1068 aa7.2□□□□□ -1.26
TRA2B-211ENST00000477939 SHTN1A0MZ66 631 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 RAD17O75943 681 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 NEFHP12036 1026 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 CST9Q5W186 159 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 ANKRD13DQ6ZTN6 518 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 MPNDQ8N594 471 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 MSL3Q8N5Y2 521 aaKnown RBP7.19□□□□□ -1.26
TRA2B-211ENST00000477939 SUPT20HQ8NEM7 779 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 CELF1Q92879 486 aaKnown RBP7.19□□□□□ -1.26
TRA2B-211ENST00000477939 FAM89AQ96GI7 184 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 FAM210AQ96ND0 272 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 TMX4Q9H1E5 349 aaPredicted RBP7.19□□□□□ -1.26
TRA2B-211ENST00000477939 ADARB2Q9NS39 739 aaKnown RBP7.19□□□□□ -1.26
TRA2B-211ENST00000477939 WBP1LQ9NX94 342 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 ABT1Q9ULW3 272 aaKnown RBP7.19□□□□□ -1.26
TRA2B-211ENST00000477939 CDHR2Q9BYE9 1310 aa7.19□□□□□ -1.26
TRA2B-211ENST00000477939 WDR33Q9C0J8 1336 aaKnown RBP7.19□□□□□ -1.26
TRA2B-211ENST00000477939 PSME4Q14997 1843 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 APAF1O14727 1248 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 ZRANB2O95218 330 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRA2B-211ENST00000477939 HIRAP54198 1017 aaPredicted RBP7.18□□□□□ -1.26
TRA2B-211ENST00000477939 SEMA3FQ13275 785 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
TRA2B-211ENST00000477939 DEFB115Q30KQ5 88 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 TMCO4Q5TGY1 634 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 CIAPIN1Q6FI81 312 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
TRA2B-211ENST00000477939 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 TRPM4Q8TD43 1214 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 AIDAQ96BJ3 306 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 PHAXQ9H814 394 aaKnown RBP7.18□□□□□ -1.26
TRA2B-211ENST00000477939 IFT57Q9NWB7 429 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 HYPKQ9NX55 129 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 MYH3P11055 1940 aa7.18□□□□□ -1.26
TRA2B-211ENST00000477939 ZNF646O15015 1829 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 CCDC66A2RUB6 948 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 VGLL3A8MV65 326 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 IRS4O14654 1257 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 ZNF500O60304 480 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 HSPA8P11142 646 aaKnown RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 CTCFP49711 727 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 LBX1P52954 281 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 GPSM2P81274 684 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 TRIM28Q13263 835 aaKnown RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 MTA1Q13330 715 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 CYP4F22Q6NT55 531 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 SDR16C5Q8N3Y7 309 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 MNS1Q8NEH6 495 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 CAPNS2Q96L46 248 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 GPR101Q96P66 508 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 GLIS2Q9BZE0 524 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 DBNDD1Q9H9R9 158 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 POLLQ9UGP5 575 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 ZBTB12Q9Y330 459 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 TLL2Q9Y6L7 1015 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 RTL9Q8NET4 1388 aa7.17□□□□□ -1.26
TRA2B-211ENST00000477939 POLR2AP24928 1970 aaKnown RBP7.17□□□□□ -1.26
TRA2B-211ENST00000477939 ELL2O00472 640 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-211ENST00000477939 PSMD14O00487 310 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 KIF1CO43896 1103 aaKnown RBP7.16□□□□□ -1.26
TRA2B-211ENST00000477939 CELF2O95319 508 aaKnown RBP7.16□□□□□ -1.26
TRA2B-211ENST00000477939 EGFRP00533 1210 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 GRM1Q13255 1194 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 TNIP1Q15025 636 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 WASHC4Q2M389 1173 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 GORABQ5T7V8 394 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 RIC3Q7Z5B4 369 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 ANKRD23Q86SG2 305 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 SAPCD2Q86UD0 394 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 MICALL2Q8IY33 904 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 ANKRD13AQ8IZ07 590 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 ZBTB38Q8NAP3 1195 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-211ENST00000477939 C8orf58Q8NAV2 365 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 MYD88Q99836 296 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 BCL2L13Q9BXK5 485 aa7.16□□□□□ -1.26
TRA2B-211ENST00000477939 NBPF3Q9H094 633 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms