RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ANKRD44Q8N8A2 993 aa10.41□□□□□ -0.74
HDAC6-221ENST00000477561 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-221ENST00000477561 KLRG1Q96E93 195 aa10.41□□□□□ -0.74
HDAC6-221ENST00000477561 MXD3Q9BW11 206 aa10.41□□□□□ -0.74
HDAC6-221ENST00000477561 PUS3Q9BZE2 481 aaKnown RBP10.41□□□□□ -0.74
HDAC6-221ENST00000477561 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
HDAC6-221ENST00000477561 MED23Q9ULK4 1368 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 ADAMTSL1Q8N6G6 1762 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 TRAF5O00463 557 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 EGFRP00533 1210 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 RSBN1LQ6PCB5 846 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-221ENST00000477561 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 PODNQ7Z5L7 613 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 KLHDC4Q8TBB5 520 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 DPF2Q92785 391 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
HDAC6-221ENST00000477561 RPS12P25398 132 aaKnown RBP10.39□□□□□ -0.75
HDAC6-221ENST00000477561 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-221ENST00000477561 RABL6Q3YEC7 729 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-221ENST00000477561 LRRC24Q50LG9 513 aa10.39□□□□□ -0.75
HDAC6-221ENST00000477561 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
HDAC6-221ENST00000477561 GLIS2Q9BZE0 524 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-221ENST00000477561 COA1Q9GZY4 146 aa10.39□□□□□ -0.75
HDAC6-221ENST00000477561 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
HDAC6-221ENST00000477561 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
HDAC6-221ENST00000477561 SCN9AQ15858 1988 aa10.39□□□□□ -0.75
HDAC6-221ENST00000477561 KIF16BQ96L93 1317 aa10.38□□□□□ -0.75
HDAC6-221ENST00000477561 TMEM88BA6NKF7 163 aa10.38□□□□□ -0.75
HDAC6-221ENST00000477561 UBTFL1P0CB47 393 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-221ENST00000477561 USP48Q86UV5 1035 aa10.38□□□□□ -0.75
HDAC6-221ENST00000477561 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
HDAC6-221ENST00000477561 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
HDAC6-221ENST00000477561 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-221ENST00000477561 USP17L8P0C7I0 530 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 GTF2IP78347 998 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 DACT2Q5SW24 774 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 ARHGAP45Q92619 1136 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 GMLQ99445 158 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 MEIS3Q99687 375 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 PGAP2Q9UHJ9 254 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 JAG2Q9Y219 1238 aa10.37□□□□□ -0.75
HDAC6-221ENST00000477561 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
HDAC6-221ENST00000477561 IRS2Q9Y4H2 1338 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 IPO8O15397 1037 aaKnown RBP10.36□□□□□ -0.75
HDAC6-221ENST00000477561 MYCNP04198 464 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-221ENST00000477561 TRIM27P14373 513 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 ZNF280AP59817 542 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-221ENST00000477561 METTL24Q5JXM2 366 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 STRIP1Q5VSL9 837 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 CST9Q5W186 159 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
HDAC6-221ENST00000477561 ATF7IPQ6VMQ6 1270 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
HDAC6-221ENST00000477561 ZNF408Q9H9D4 720 aa10.36□□□□□ -0.75
HDAC6-221ENST00000477561 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
HDAC6-221ENST00000477561 MROH5Q6ZUA9 1318 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 ADM5C9JUS6 153 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 CELF2O95319 508 aaKnown RBP10.35□□□□□ -0.75
HDAC6-221ENST00000477561 GYG1P46976 350 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 RFX5P48382 616 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-221ENST00000477561 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 SCARF1Q14162 830 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
HDAC6-221ENST00000477561 CDC37L1Q7L3B6 337 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 KIAA0825Q8IV33 1275 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 DCPSQ96C86 337 aaKnown RBP10.35□□□□□ -0.75
HDAC6-221ENST00000477561 SIL1Q9H173 461 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 MYOZ2Q9NPC6 264 aa10.35□□□□□ -0.75
HDAC6-221ENST00000477561 SCAF8Q9UPN6 1271 aaKnown RBP10.35□□□□□ -0.75
HDAC6-221ENST00000477561 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-221ENST00000477561 F8W031 263 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-221ENST00000477561 VEGFBP49765 207 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 PTPN12Q05209 780 aaKnown RBP10.34□□□□□ -0.75
HDAC6-221ENST00000477561 GRM1Q13255 1194 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 DEFB115Q30KQ5 88 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 NBPF9Q3BBW0 867 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 ANGEL2Q5VTE6 544 aaKnown RBP10.34□□□□□ -0.75
HDAC6-221ENST00000477561 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-221ENST00000477561 KRT26Q7Z3Y9 468 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 OGFOD1Q8N543 542 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 JMYQ8N9B5 988 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 FAM84BQ96KN1 310 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-221ENST00000477561 GGA3Q9NZ52 723 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 IQSEC3Q9UPP2 1182 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-221ENST00000477561 A0A1B0GUL6 1792 aa10.34□□□□□ -0.75
HDAC6-221ENST00000477561 MYO3BQ8WXR4 1341 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 PCNTO95613 3336 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 EYA2O00167 538 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 SASH1O94885 1247 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 PDE8BO95263 885 aa10.33□□□□□ -0.76
HDAC6-221ENST00000477561 IL1R1P14778 569 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms