RNA–Protein interactions for RNA: ENST00000475915.6

PDCD10-209, Transcript of programmed cell death 10, human

TSL 5

Gene PDCD10, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD10-209	ENST00000475915	GDF6	Q6KF10	455 aa	Predicted RBP	10.11	□□□□□ -0.79
PDCD10-209	ENST00000475915	WFDC8	Q8IUA0	241 aa		10.11	□□□□□ -0.79
PDCD10-209	ENST00000475915	CCDC74A	Q96AQ1	378 aa		10.11	□□□□□ -0.79
PDCD10-209	ENST00000475915	POP1	Q99575	1024 aa	Known RBP	10.11	□□□□□ -0.79
PDCD10-209	ENST00000475915	SUV39H2	Q9H5I1	410 aa		10.11	□□□□□ -0.79
PDCD10-209	ENST00000475915	LATS2	Q9NRM7	1088 aa		10.11	□□□□□ -0.79
PDCD10-209	ENST00000475915	PDE2A	O00408	941 aa	Predicted RBP	10.1	□□□□□ -0.79
PDCD10-209	ENST00000475915	BAG6	P46379	1132 aa		10.1	□□□□□ -0.79
PDCD10-209	ENST00000475915	KIAA0319	Q5VV43	1072 aa		10.1	□□□□□ -0.79
PDCD10-209	ENST00000475915	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.1	□□□□□ -0.79
PDCD10-209	ENST00000475915	ADAM19	Q9H013	955 aa		10.1	□□□□□ -0.79
PDCD10-209	ENST00000475915	MUC3B	Q9H195	1237 aa		10.1	□□□□□ -0.79
PDCD10-209	ENST00000475915	PNMA6F	A0A0J9YX94	578 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915		A0A1W2PP55	124 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	PTPRA	P18433	802 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	COL8A1	P27658	744 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	TRIM26	Q12899	539 aa	Predicted RBP	10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	TRAPPC3L	Q5T215	181 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	TMCO4	Q5TGY1	634 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	DTWD1	Q8N5C7	304 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	NXPE3	Q969Y0	559 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	NPHS2	Q9NP85	383 aa		10.09	□□□□□ -0.79
PDCD10-209	ENST00000475915	MAPK8	P45983	427 aa		10.08	□□□□□ -0.8
PDCD10-209	ENST00000475915	GSK3A	P49840	483 aa		10.08	□□□□□ -0.8
PDCD10-209	ENST00000475915	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.08	□□□□□ -0.8
PDCD10-209	ENST00000475915	IL22RA1	Q8N6P7	574 aa		10.08	□□□□□ -0.8
PDCD10-209	ENST00000475915	FBF1	Q8TES7	1133 aa		10.08	□□□□□ -0.8
PDCD10-209	ENST00000475915		A0A0A0MRY4	1105 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	TRPA1	O75762	1119 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	P4HB	P07237	508 aa	Known RBP	10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	CDC27	P30260	824 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	PRRT3	Q5FWE3	981 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	NPAS4	Q8IUM7	802 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	HHIP	Q96QV1	700 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	SRA1	Q9HD15	236 aa	Known RBP	10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	PPME1	Q9Y570	386 aa		10.07	□□□□□ -0.8
PDCD10-209	ENST00000475915	FAM177B	A6PVY3	158 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	SPATA31C1	P0DKV0	1188 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	RAC1	P63000	192 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	RASSF7	Q02833	373 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	TRIM28	Q13263	835 aa	Known RBP	10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	ALG1L	Q6GMV1	187 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	ADAMTSL4	Q6UY14	1074 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	CCNJL	Q8IV13	435 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	LACRT	Q9GZZ8	138 aa		10.06	□□□□□ -0.8
PDCD10-209	ENST00000475915	ATP2B2	Q01814	1243 aa		10.05	□□□□□ -0.8
PDCD10-209	ENST00000475915	MAP4K3	Q8IVH8	894 aa		10.05	□□□□□ -0.8
PDCD10-209	ENST00000475915	TCF12	Q99081	682 aa		10.05	□□□□□ -0.8
PDCD10-209	ENST00000475915	LIN7B	Q9HAP6	207 aa		10.05	□□□□□ -0.8
PDCD10-209	ENST00000475915	NLRP2	Q9NX02	1062 aa		10.05	□□□□□ -0.8
PDCD10-209	ENST00000475915	FGD1	P98174	961 aa		10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	EPS8L3	Q8TE67	593 aa	Known RBP	10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	BSND	Q8WZ55	320 aa		10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	DCAF5	Q96JK2	942 aa		10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	EHD4	Q9H223	541 aa		10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	SOX13	Q9UN79	622 aa		10.04	□□□□□ -0.8
PDCD10-209	ENST00000475915	PRPF40B	Q6NWY9	871 aa	Known RBP	10.03	□□□□□ -0.8
PDCD10-209	ENST00000475915	DCAF11	Q8TEB1	546 aa		10.03	□□□□□ -0.8
PDCD10-209	ENST00000475915	TRAK1	Q9UPV9	953 aa		10.03	□□□□□ -0.8
PDCD10-209	ENST00000475915	GADD45B	O75293	160 aa	Predicted RBP	10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	LDHB	P07195	334 aa	Known RBP	10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	ELN	P15502	786 aa		10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	EPHA1	P21709	976 aa		10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	CABP4	P57796	275 aa		10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	EAPP	Q56P03	285 aa	Predicted RBP	10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	FBXO11	Q86XK2	927 aa		10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.02	□□□□□ -0.81
PDCD10-209	ENST00000475915		H3BRJ5	948 aa		10.01	□□□□□ -0.81
PDCD10-209	ENST00000475915	GRM2	Q14416	872 aa		10.01	□□□□□ -0.81
PDCD10-209	ENST00000475915	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
PDCD10-209	ENST00000475915	TMEM151A	Q8N4L1	468 aa		10.01	□□□□□ -0.81
PDCD10-209	ENST00000475915	ASAP3	Q8TDY4	903 aa		10.01	□□□□□ -0.81
PDCD10-209	ENST00000475915		A0A096LPE4	126 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915		A0A1W2PPZ6	126 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	FAM229A	H3BQW9	127 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	DEAF1	O75398	565 aa	Predicted RBP	10	□□□□□ -0.81
PDCD10-209	ENST00000475915	PRPF40A	O75400	957 aa	Known RBP	10	□□□□□ -0.81
PDCD10-209	ENST00000475915	GDF11	O95390	407 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	GRIA4	P48058	902 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	MFAP1	P55081	439 aa	Known RBP	10	□□□□□ -0.81
PDCD10-209	ENST00000475915	SETDB1	Q15047	1291 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	FAM117B	Q6P1L5	589 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	PI16	Q6UXB8	463 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	GLIS3	Q8NEA6	775 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	WNT8B	Q93098	351 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	WWC3	Q9ULE0	1092 aa		10	□□□□□ -0.81
PDCD10-209	ENST00000475915	METTL12	A8MUP2	240 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	LINC01387	J3KSC0	135 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	GIPC1	O14908	333 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	ITPKA	P23677	461 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	PTPN12	Q05209	780 aa	Known RBP	9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	VN1R5	Q7Z5H4	357 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	FBXO33	Q7Z6M2	555 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	NACC1	Q96RE7	527 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	SETDB2	Q96T68	719 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	ABCB6	Q9NP58	842 aa		9.99	□□□□□ -0.81
PDCD10-209	ENST00000475915	KRBA1	A5PL33	1030 aa		9.98	□□□□□ -0.81
PDCD10-209	ENST00000475915	PIP4K2B	P78356	416 aa		9.98	□□□□□ -0.81
PDCD10-209	ENST00000475915	KLHL23	Q8NBE8	558 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms