RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 PTPRAP18433 802 aa9.73□□□□□ -0.85
TM9SF3-204ENST00000475401 WFDC8Q8IUA0 241 aa9.73□□□□□ -0.85
TM9SF3-204ENST00000475401 ZKSCAN3Q9BRR0 538 aa9.73□□□□□ -0.85
TM9SF3-204ENST00000475401 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
TM9SF3-204ENST00000475401 AFF1P51825 1210 aaKnown RBP9.72□□□□□ -0.85
TM9SF3-204ENST00000475401 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
TM9SF3-204ENST00000475401 TMEM102Q8N9M5 508 aaPredicted RBP9.72□□□□□ -0.85
TM9SF3-204ENST00000475401 LATS2Q9NRM7 1088 aa9.72□□□□□ -0.85
TM9SF3-204ENST00000475401 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
TM9SF3-204ENST00000475401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.72□□□□□ -0.85
TM9SF3-204ENST00000475401 A0A1W2PP55 124 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 ITGAEP38570 1179 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 CABP4P57796 275 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 SNRPNP63162 240 aaKnown RBP9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 IL22RA1Q8N6P7 574 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 EPS8L3Q8TE67 593 aaKnown RBP9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 LACRTQ9GZZ8 138 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 MUC3BQ9H195 1237 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 LIN7BQ9HAP6 207 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 TRIM33Q9UPN9 1127 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 SPG7Q9UQ90 795 aa9.71□□□□□ -0.86
TM9SF3-204ENST00000475401 PRPF40AO75400 957 aaKnown RBP9.7□□□□□ -0.86
TM9SF3-204ENST00000475401 ACPPP15309 386 aa9.7□□□□□ -0.86
TM9SF3-204ENST00000475401 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.862e-8■□□□□ 9.4
TM9SF3-204ENST00000475401 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
TM9SF3-204ENST00000475401 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
TM9SF3-204ENST00000475401 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
TM9SF3-204ENST00000475401 POP1Q99575 1024 aaKnown RBP9.7□□□□□ -0.86
TM9SF3-204ENST00000475401 CDC27P30260 824 aa9.69□□□□□ -0.86
TM9SF3-204ENST00000475401 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
TM9SF3-204ENST00000475401 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
TM9SF3-204ENST00000475401 NXPE3Q969Y0 559 aa9.69□□□□□ -0.86
TM9SF3-204ENST00000475401 FRMD6Q96NE9 622 aa9.69□□□□□ -0.86
TM9SF3-204ENST00000475401 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
TM9SF3-204ENST00000475401 CNTNAP5Q8WYK1 1306 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 GIPC1O14908 333 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 TRPA1O75762 1119 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 IRS1P35568 1242 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 RAC1P63000 192 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 LINC00114Q6XXX2 140 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 BHLHE41Q9C0J9 482 aaPredicted RBP9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
TM9SF3-204ENST00000475401 NID1P14543 1247 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 GRIK5Q16478 980 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 PRRT3Q5FWE3 981 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 CCNJLQ8IV13 435 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 DMRTC2Q8IXT2 367 aaPredicted RBP9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 DCAF11Q8TEB1 546 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 PLVAPQ9BX97 442 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 PPME1Q9Y570 386 aa9.67□□□□□ -0.86
TM9SF3-204ENST00000475401 NFKBIEO00221 500 aa9.66□□□□□ -0.86
TM9SF3-204ENST00000475401 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
TM9SF3-204ENST00000475401 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
TM9SF3-204ENST00000475401 PI16Q6UXB8 463 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 DTWD1Q8N5C7 304 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 HHIPQ96QV1 700 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 DUSP9Q99956 384 aaKnown RBP9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 BCO2Q9BYV7 579 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 ADAM19Q9H013 955 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 ZFYVE1Q9HBF4 777 aa9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 SRA1Q9HD15 236 aaKnown RBP9.65□□□□□ -0.86
TM9SF3-204ENST00000475401 GNA15P30679 374 aa9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 GRM2Q14416 872 aa9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 MAP4K3Q8IVH8 894 aa9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 TRIM11Q96F44 468 aa9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 TCF12Q99081 682 aa9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 MRS2Q9HD23 443 aa9.64□□□□□ -0.87
TM9SF3-204ENST00000475401 A0A096LPE4 126 aa9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 A0A1W2PPZ6 126 aa9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 XRCC5P13010 732 aaKnown RBP9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 ARL4DP49703 201 aa9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 PSMD2Q13200 908 aa9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 DTHD1Q6ZMT9 781 aa9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 SH2B1Q9NRF2 756 aaPredicted RBP9.63□□□□□ -0.87
TM9SF3-204ENST00000475401 TMEM238LA0A1B0GVL6 79 aa9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 H3BRJ5 948 aa9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 CDC25BP30305 580 aa9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 COL9A3Q14050 684 aaPredicted RBP9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 NXPE4Q6UWF7 544 aa9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 ALYREFQ86V81 257 aaKnown RBP9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 PARP2Q9UGN5 583 aa9.62□□□□□ -0.87
TM9SF3-204ENST00000475401 METTL12A8MUP2 240 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 LINC01387J3KSC0 135 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 GSTT1P30711 240 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 BAG6P46379 1132 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 GRIA4P48058 902 aa9.61□□□□□ -0.87
TM9SF3-204ENST00000475401 FCGRTP55899 365 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms