RNA–Protein interactions for RNA: ENST00000474783.2

PAX6-216, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 4,392 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-216ENST00000474783 CEP85Q6P2H3 762 aa9.31□□□□□ -0.92
PAX6-216ENST00000474783 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
PAX6-216ENST00000474783 YY1AP1Q9H869 796 aa9.31□□□□□ -0.92
PAX6-216ENST00000474783 MICALCLQ6ZW33 695 aa9.31□□□□□ -0.92
PAX6-216ENST00000474783 MSL3Q8N5Y2 521 aaKnown RBP9.31□□□□□ -0.92
PAX6-216ENST00000474783 OTUD6BQ8N6M0 293 aa9.31□□□□□ -0.92
PAX6-216ENST00000474783 RGPD5Q99666 1765 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 A0A1B0GUL7 405 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 SPDYE4A6NLX3 237 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 KIF3CO14782 793 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 ERCC3P19447 782 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 ZNF280DQ6N043 979 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 IQCGQ9H095 443 aaKnown RBP9.3□□□□□ -0.92
PAX6-216ENST00000474783 MYH15Q9Y2K3 1946 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
PAX6-216ENST00000474783 ATICP31939 592 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 CAVIN4Q5BKX8 364 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 TRIM63Q969Q1 353 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 CEP104O60308 925 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 SETDB1Q15047 1291 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 CDK5RAP3Q96JB5 506 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 CHCHD3Q9NX63 227 aaKnown RBP9.3□□□□□ -0.92
PAX6-216ENST00000474783 FEZ2Q9UHY8 353 aaPredicted RBP9.3□□□□□ -0.92
PAX6-216ENST00000474783 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 ACEP12821 1306 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 ADGRL3Q9HAR2 1447 aa9.3□□□□□ -0.92
PAX6-216ENST00000474783 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 DDX46Q7L014 1031 aaKnown RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 SMARCE1Q969G3 411 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 ZNF396Q96N95 335 aaPredicted RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 TSPY26PQ9H489 355 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 CYP46A1Q9Y6A2 500 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 CCDC92Q53HC0 331 aaPredicted RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 APBB1IPQ7Z5R6 666 aaPredicted RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 NUP133Q8WUM0 1156 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 MAP3K19Q56UN5 1328 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 NUP188Q5SRE5 1749 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 IFIT1P09914 478 aaKnown RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 SEPT7Q16181 437 aaKnown RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
PAX6-216ENST00000474783 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.29□□□□□ -0.92
PAX6-216ENST00000474783 CEP126Q9P2H0 1117 aa9.29□□□□□ -0.92
PAX6-216ENST00000474783 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 PIP4K2AP48426 406 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 DPY19L2Q6NUT2 758 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 CRACR2BQ8N4Y2 399 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 USP25Q9UHP3 1055 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 RXRBP28702 533 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 MCM6Q14566 821 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 TNIP1Q15025 636 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 BRD3Q15059 726 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 EYA3Q99504 573 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 USP26Q9BXU7 913 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 MAGEC2Q9UBF1 373 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 KRT18P05783 430 aaKnown RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 ME1P48163 572 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 KRT85P78386 507 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 ZKSCAN8Q15776 578 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 RPAP2Q8IXW5 612 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 MKL2Q9ULH7 1088 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 LIMCH1Q9UPQ0 1083 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 SPC24Q8NBT2 197 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 TNPO1Q92973 898 aaKnown RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 SIL1Q9H173 461 aa9.28□□□□□ -0.92
PAX6-216ENST00000474783 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
PAX6-216ENST00000474783 C6orf229H3BNL8 230 aa9.27□□□□□ -0.92
PAX6-216ENST00000474783 CCDC192P0DO97 292 aa9.27□□□□□ -0.92
PAX6-216ENST00000474783 CCT4P50991 539 aaKnown RBP9.27□□□□□ -0.92
PAX6-216ENST00000474783 BLVRAP53004 296 aa9.27□□□□□ -0.92
PAX6-216ENST00000474783 ANKRD18AQ8IVF6 992 aa9.27□□□□□ -0.92
PAX6-216ENST00000474783 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.92
PAX6-216ENST00000474783 WDR33Q9C0J8 1336 aaKnown RBP9.27□□□□□ -0.93
PAX6-216ENST00000474783 SERPINC1P01008 464 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 DMTNQ08495 405 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 STK3Q13188 491 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 SEPT6Q14141 434 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 GBP6Q6ZN66 633 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 RNF216Q9NWF9 866 aaPredicted RBP9.27□□□□□ -0.93
PAX6-216ENST00000474783 PLEKHG2Q9H7P9 1386 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 ATP2B2Q01814 1243 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
PAX6-216ENST00000474783 FAM184BQ9ULE4 1060 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 SHANK3Q9BYB0 1731 aa9.27□□□□□ -0.93
PAX6-216ENST00000474783 K7ELQ4 463 aaPredicted RBP9.26□□□□□ -0.93
PAX6-216ENST00000474783 NEBLO76041 1014 aa9.26□□□□□ -0.93
PAX6-216ENST00000474783 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
PAX6-216ENST00000474783 BLOC1S2Q6QNY1 142 aa9.26□□□□□ -0.93
PAX6-216ENST00000474783 USP6NLQ92738 828 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms