RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 ALDH1L1O75891 902 aa12.58□□□□□ -0.39
LSS-208ENST00000474319 MARCKSP29966 332 aaPredicted RBP12.58□□□□□ -0.39
LSS-208ENST00000474319 GTF3C6Q969F1 213 aa12.58□□□□□ -0.39
LSS-208ENST00000474319 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 ANKRD1Q15327 319 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 SPTLC3Q9NUV7 552 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 ERICH4A6NGS2 130 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.4
LSS-208ENST00000474319 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
LSS-208ENST00000474319 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
LSS-208ENST00000474319 DDX19AQ9NUU7 478 aaKnown RBP12.57□□□□□ -0.4
LSS-208ENST00000474319 CCDC69A6NI79 296 aa12.57□□□□□ -0.4
LSS-208ENST00000474319 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
LSS-208ENST00000474319 LRRC24Q50LG9 513 aa12.57□□□□□ -0.4
LSS-208ENST00000474319 CEP135Q66GS9 1140 aa12.57□□□□□ -0.4
LSS-208ENST00000474319 CHMP4CQ96CF2 233 aa12.57□□□□□ -0.4
LSS-208ENST00000474319 HIP1O00291 1037 aa12.57□□□□□ -0.4
LSS-208ENST00000474319 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
LSS-208ENST00000474319 FMN2Q9NZ56 1722 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 APPP05067 770 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 RESTQ13127 1097 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 ZNF215Q9UL58 517 aaPredicted RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 LMOD1P29536 600 aaPredicted RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 PTPN12Q05209 780 aaKnown RBP12.56□□□□□ -0.4
LSS-208ENST00000474319 PDIA6Q15084 440 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 STK38Q15208 465 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 AIFM3Q96NN9 605 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 DENND2AQ9ULE3 1009 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
LSS-208ENST00000474319 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 TMC6Q7Z403 805 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 PTPN14Q15678 1187 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 ELF2Q15723 593 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 DDB1Q16531 1140 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 SPECC1Q5M775 1068 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 MEGF6O75095 1541 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 HOMER1Q86YM7 354 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 CFAP45Q9UL16 551 aa12.55□□□□□ -0.4
LSS-208ENST00000474319 CPLX1O14810 134 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 GNL2Q13823 731 aaKnown RBP12.54□□□□□ -0.4
LSS-208ENST00000474319 SMAP1Q8IYB5 467 aaPredicted RBP12.54□□□□□ -0.4
LSS-208ENST00000474319 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 NSUN7Q8NE18 718 aaKnown RBP12.54□□□□□ -0.4
LSS-208ENST00000474319 CLIC4Q9Y696 253 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 CTDNEP1O95476 244 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 IFIT1P09914 478 aaKnown RBP12.54□□□□□ -0.4
LSS-208ENST00000474319 MTX1Q13505 466 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 MYL10Q9BUA6 226 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 IFNKQ9P0W0 207 aa12.54□□□□□ -0.4
LSS-208ENST00000474319 ZNF609O15014 1411 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 NDUFA8P51970 172 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 LRRC8AQ8IWT6 810 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 INCENPQ9NQS7 918 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 PCDH11XQ9BZA7 1347 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 PCDH11YQ9BZA8 1340 aa12.53□□□□□ -0.4
LSS-208ENST00000474319 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 ADORA1P30542 326 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.4
LSS-208ENST00000474319 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.4
LSS-208ENST00000474319 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 E7EWF7 191 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 KCNQ2O43526 872 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 STX1AQ16623 288 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 CREBRFQ8IUR6 639 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 SYNE4Q8N205 404 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 PIGBQ92521 554 aa12.52□□□□□ -0.4
LSS-208ENST00000474319 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.4
LSS-208ENST00000474319 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.41
LSS-208ENST00000474319 DHX32Q7L7V1 743 aaKnown RBP12.52□□□□□ -0.41
LSS-208ENST00000474319 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
LSS-208ENST00000474319 CCAR2Q8N163 923 aaKnown RBP12.52□□□□□ -0.41
LSS-208ENST00000474319 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
LSS-208ENST00000474319 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
LSS-208ENST00000474319 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.41
LSS-208ENST00000474319 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.41
LSS-208ENST00000474319 TPM3P06753 285 aa12.51□□□□□ -0.41
LSS-208ENST00000474319 KRT32Q14532 448 aa12.51□□□□□ -0.41
LSS-208ENST00000474319 M0R2C6 588 aa12.51□□□□□ -0.41
LSS-208ENST00000474319 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
LSS-208ENST00000474319 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms