RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	GLRX3	O76003	335 aa	Known RBP	12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	UFL1	O94874	794 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	CAVIN4	Q5BKX8	364 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	TTC39A	Q5SRH9	613 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	TTC22	Q5TAA0	569 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	CC2D2B	Q6DHV5	1058 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	OLFM4	Q6UX06	510 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	RNF216	Q9NWF9	866 aa	Predicted RBP	12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	PODXL2	Q9NZ53	605 aa		12.87	□□□□□ -0.35
PUM1-208	ENST00000471894	ATP5J	P18859	108 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	DALRD3	Q5D0E6	543 aa	Known RBP	12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	DPP8	Q6V1X1	898 aa	Predicted RBP	12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	VPS37D	Q86XT2	251 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	PI4K2B	Q8TCG2	481 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	C7orf43	Q8WVR3	580 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	BOLA2	Q9H3K6	86 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	WWC3	Q9ULE0	1092 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894		A0A1B0GUL6	1792 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	DLEC1	Q9Y238	1755 aa		12.86	□□□□□ -0.35
PUM1-208	ENST00000471894	TRIM6-TRIM34	B2RNG4	842 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	UQCRFS1P1	P0C7P4	283 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	GYG1	P46976	350 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	BCAM	P50895	628 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	GRIPAP1	Q4V328	841 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	BMP2KL	Q5H9B9	411 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	CCDC102B	Q68D86	513 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	NLGN2	Q8NFZ4	835 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	TBC1D16	Q8TBP0	767 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	GNL3L	Q9NVN8	582 aa	Known RBP	12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	POLL	Q9UGP5	575 aa		12.85	□□□□□ -0.35
PUM1-208	ENST00000471894	MAP4K4	O95819	1239 aa	Predicted RBP	12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	GSPT1	P15170	499 aa	Known RBP	12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	HIBADH	P31937	336 aa	Known RBP	12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	PHKA1	P46020	1223 aa		12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	RTKN2	Q8IZC4	609 aa		12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	RILPL2	Q969X0	211 aa		12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	FAM84B	Q96KN1	310 aa	Predicted RBP	12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	KIAA1551	Q9HCM1	1747 aa		12.84	□□□□□ -0.35
PUM1-208	ENST00000471894	LRRC37A	A6NMS7	1700 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	RIMBP2	O15034	1052 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	KLRK1	P26718	216 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	CCDC93	Q567U6	631 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	SOGA3	Q5TF21	947 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	C15orf52	Q6ZUT6	534 aa	Known RBP	12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	FBXO33	Q7Z6M2	555 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	TXNRD3	Q86VQ6	643 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	GPR101	Q96P66	508 aa	Predicted RBP	12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	EYA3	Q99504	573 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	DNAJC2	Q99543	621 aa	Known RBP	12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	HAUS7	Q99871	368 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.83	□□□□□ -0.36
PUM1-208	ENST00000471894	BCS1L	Q9Y276	419 aa		12.83	□□□□□ -0.36
PUM1-208	ENST00000471894		G3V3G9	751 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	FRAT2	O75474	233 aa	Predicted RBP	12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	SDS	P20132	328 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	ARID4A	P29374	1257 aa	Predicted RBP	12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	WASHC4	Q2M389	1173 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	DCAF8	Q5TAQ9	597 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	ZNF804A	Q7Z570	1209 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	CNTROB	Q8N137	903 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	SUPT20H	Q8NEM7	779 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	SYT17	Q9BSW7	474 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	SNRK	Q9NRH2	765 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	ARAP2	Q8WZ64	1704 aa		12.82	□□□□□ -0.36
PUM1-208	ENST00000471894	HOXD11	P31277	338 aa	Predicted RBP	12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	MCAM	P43121	646 aa		12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	SCARF1	Q14162	830 aa		12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	EVI5L	Q96CN4	794 aa		12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	NDUFB9	Q9Y6M9	179 aa		12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	IRS2	Q9Y4H2	1338 aa		12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	MED23	Q9ULK4	1368 aa		12.81	□□□□□ -0.36
PUM1-208	ENST00000471894	BRCA1	P38398	1863 aa	Known RBP	12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	GOLIM4	O00461	696 aa		12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	ZAP70	P43403	619 aa		12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	SPATA5	Q8NB90	893 aa		12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	PAG1	Q9NWQ8	432 aa		12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	HMG20B	Q9P0W2	317 aa		12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	DENND2A	Q9ULE3	1009 aa		12.8	□□□□□ -0.36
PUM1-208	ENST00000471894	LTBP1	Q14766	1721 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	SEMA3E	O15041	775 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	RASGRF1	Q13972	1273 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	PI16	Q6UXB8	463 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	TDRD7	Q8NHU6	1098 aa	Known RBP	12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	EDC3	Q96F86	508 aa	Known RBP	12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	PSMD1	Q99460	953 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	COA1	Q9GZY4	146 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	CD209	Q9NNX6	404 aa		12.79	□□□□□ -0.36
PUM1-208	ENST00000471894	TTF1	Q15361	905 aa	Predicted RBP	12.78	□□□□□ -0.36
PUM1-208	ENST00000471894	DOK7	Q18PE1	504 aa		12.78	□□□□□ -0.36
PUM1-208	ENST00000471894	FSD1	Q9BTV5	496 aa		12.78	□□□□□ -0.36
PUM1-208	ENST00000471894	AK9	Q5TCS8	1911 aa		12.78	□□□□□ -0.36
PUM1-208	ENST00000471894	AKAP11	Q9UKA4	1901 aa		12.78	□□□□□ -0.36
PUM1-208	ENST00000471894	DUOX1	Q9NRD9	1551 aa		12.77	□□□□□ -0.36
PUM1-208	ENST00000471894	PPIP5K2	O43314	1243 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms