RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 RECKO95980 971 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 CES1P23141 567 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 MAPK1P28482 360 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 GRIK5Q16478 980 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 PMEPA1Q969W9 287 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 KANSL3Q9P2N6 904 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 DCTN4Q9UJW0 460 aa6.7□□□□□ -1.34
TTC3-213ENST00000469939 TRAPPC3LQ5T215 181 aa6.69□□□□□ -1.34
TTC3-213ENST00000469939 SNX29Q8TEQ0 813 aa6.69□□□□□ -1.34
TTC3-213ENST00000469939 SREK1Q8WXA9 508 aaKnown RBP6.69□□□□□ -1.34
TTC3-213ENST00000469939 CITED4Q96RK1 184 aa6.69□□□□□ -1.34
TTC3-213ENST00000469939 CHRDQ9H2X0 955 aa6.69□□□□□ -1.34
TTC3-213ENST00000469939 PHACTR2O75167 634 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 SPATA31C1P0DKV0 1188 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 PRRT3Q5FWE3 981 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 CD163Q86VB7 1156 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 CEP120Q8N960 986 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 SALL4Q9UJQ4 1053 aa6.68□□□□□ -1.34
TTC3-213ENST00000469939 FOXD3Q9UJU5 478 aaPredicted RBP6.68□□□□□ -1.34
TTC3-213ENST00000469939 CHRNA4P43681 627 aa6.67□□□□□ -1.34
TTC3-213ENST00000469939 ZC3H6P61129 1189 aaKnown RBP6.67□□□□□ -1.34
TTC3-213ENST00000469939 ATP11AP98196 1134 aa6.67□□□□□ -1.34
TTC3-213ENST00000469939 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
TTC3-213ENST00000469939 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
TTC3-213ENST00000469939 GDF6Q6KF10 455 aaPredicted RBP6.67□□□□□ -1.34
TTC3-213ENST00000469939 ILDR2Q71H61 639 aa6.67□□□□□ -1.34
TTC3-213ENST00000469939 WFDC8Q8IUA0 241 aa6.67□□□□□ -1.34
TTC3-213ENST00000469939 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
TTC3-213ENST00000469939 DMRTC2Q8IXT2 367 aaPredicted RBP6.67□□□□□ -1.34
TTC3-213ENST00000469939 FAM129BQ96TA1 746 aa6.67□□□□□ -1.34
TTC3-213ENST00000469939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.67□□□□□ -1.34
TTC3-213ENST00000469939 A0A0A0MRY4 1105 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 EREGO14944 169 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 SMNDC1O75940 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
TTC3-213ENST00000469939 RAC1P63000 192 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 DOC2BQ14184 412 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 TMC1Q8TDI8 760 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 PBX4Q9BYU1 374 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 RASSF4Q9H2L5 321 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 SEMA6BQ9H3T3 888 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 TRIM33Q9UPN9 1127 aa6.66□□□□□ -1.34
TTC3-213ENST00000469939 NEFLP07196 543 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 CEP135Q66GS9 1140 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 CACTIN-AS1Q8N1I8 211 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 RBCK1Q9BYM8 510 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 ZFYVE28Q9HCC9 887 aa6.65□□□□□ -1.34
TTC3-213ENST00000469939 EDN3P14138 238 aa6.64□□□□□ -1.35
TTC3-213ENST00000469939 EAPPQ56P03 285 aaPredicted RBP6.64□□□□□ -1.35
TTC3-213ENST00000469939 NAALADL2Q58DX5 795 aa6.64□□□□□ -1.35
TTC3-213ENST00000469939 DTWD1Q8N5C7 304 aa6.64□□□□□ -1.35
TTC3-213ENST00000469939 IL22RA1Q8N6P7 574 aa6.64□□□□□ -1.35
TTC3-213ENST00000469939 DMRTB1Q96MA1 342 aa6.64□□□□□ -1.35
TTC3-213ENST00000469939 GPR182O15218 404 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 APBA3O96018 575 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 IGHA2P01877 340 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 ACPPP15309 386 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 ELNP15502 786 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 CDK11BP21127 795 aaKnown RBP6.63□□□□□ -1.35
TTC3-213ENST00000469939 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 FMR1NBQ8N0W7 255 aaPredicted RBP6.63□□□□□ -1.35
TTC3-213ENST00000469939 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
TTC3-213ENST00000469939 LACRTQ9GZZ8 138 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 DZANK1Q9NVP4 752 aa6.63□□□□□ -1.35
TTC3-213ENST00000469939 CDK11AQ9UQ88 783 aaPredicted RBP6.63□□□□□ -1.35
TTC3-213ENST00000469939 NFKBIEO00221 500 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 GATA4P43694 442 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 ORC1Q13415 861 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 MRPL58Q14197 206 aaKnown RBP6.62□□□□□ -1.35
TTC3-213ENST00000469939 GRIK4Q16099 956 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 TMC7Q7Z402 723 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 NACC1Q96RE7 527 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 OSMRQ99650 979 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 NIF3L1Q9GZT8 377 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
TTC3-213ENST00000469939 SCO2A0A1W2PP80 73 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 PDE2AO00408 941 aaPredicted RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 TRPA1O75762 1119 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 POLR3DP05423 398 aaPredicted RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 P4HBP07237 508 aaKnown RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 PTPRAP18433 802 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 CDC27P30260 824 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 LDLRAD1Q5T700 205 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 ADAMTSL4Q6UY14 1074 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 FBXO11Q86XK2 927 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 TMEM102Q8N9M5 508 aaPredicted RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 ALKBH8Q96BT7 664 aaKnown RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 ZKSCAN3Q9BRR0 538 aa6.61□□□□□ -1.35
TTC3-213ENST00000469939 PPP1R1BQ9UD71 204 aaPredicted RBP6.61□□□□□ -1.35
TTC3-213ENST00000469939 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms