RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 IDH1O75874 414 aaKnown RBP11.17□□□□□ -0.62
TOP3A-203ENST00000469739 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
TOP3A-203ENST00000469739 OSBP2Q969R2 916 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-203ENST00000469739 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 ZNF445P59923 1031 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 BICDL1Q6ZP65 573 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 FTOQ9C0B1 505 aaKnown RBP eCLIP11.17□□□□□ -0.62
TOP3A-203ENST00000469739 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 EP400Q96L91 3159 aa11.17□□□□□ -0.62
TOP3A-203ENST00000469739 MBD3O95983 291 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 CCDC158Q5M9N0 1113 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-203ENST00000469739 NUP188Q5SRE5 1749 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 H3BQV1 296 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-203ENST00000469739 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
TOP3A-203ENST00000469739 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
TOP3A-203ENST00000469739 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
TOP3A-203ENST00000469739 RXRAP19793 462 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 CKAP2LQ8IYA6 745 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 FAM184AQ8NB25 1140 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 GJB4Q9NTQ9 266 aa11.16□□□□□ -0.62
TOP3A-203ENST00000469739 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
TOP3A-203ENST00000469739 MAST3O60307 1309 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 KCNQ2O43526 872 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 MTERF4Q7Z6M4 381 aaKnown RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 PUS7LQ9H0K6 701 aaKnown RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 INCENPQ9NQS7 918 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 COL14A1Q05707 1796 aaKnown RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 GOLGA6L4A6NEF3 574 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 NLRP10Q86W26 655 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 ZSCAN31Q96LW9 406 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 TM6SF1Q9BZW5 370 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 TSPY26PQ9H489 355 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 SH2B1Q9NRF2 756 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 USP25Q9UHP3 1055 aa11.15□□□□□ -0.62
TOP3A-203ENST00000469739 COL16A1Q07092 1604 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-203ENST00000469739 A0A087WWV3 80 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-203ENST00000469739 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 ATP2B3Q16720 1220 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 COL22A1Q8NFW1 1626 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-203ENST00000469739 WNK3Q9BYP7 1800 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 SCRN1Q12765 414 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-203ENST00000469739 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
TOP3A-203ENST00000469739 LIG1P18858 919 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 TTLL11Q8NHH1 800 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 PPP1R9BQ96SB3 815 aa11.14□□□□□ -0.63
TOP3A-203ENST00000469739 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-203ENST00000469739 AHDC1Q5TGY3 1603 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-203ENST00000469739 CYP19A1P11511 503 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-203ENST00000469739 GIGYF2Q6Y7W6 1299 aaKnown RBP11.13□□□□□ -0.63
TOP3A-203ENST00000469739 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-203ENST00000469739 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 TJP1Q07157 1748 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 ITGB4P16144 1822 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 MAP3K15Q6ZN16 1313 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 E7EWF7 191 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 PHKA1P46020 1223 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 SLC9C2Q5TAH2 1124 aa11.13□□□□□ -0.63
TOP3A-203ENST00000469739 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-203ENST00000469739 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 UQCRHP07919 91 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 DDB1Q16531 1140 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 SYAP1Q96A49 352 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-203ENST00000469739 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 MCAMP43121 646 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-203ENST00000469739 TOMM22Q9NS69 142 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 ATP6V1DQ9Y5K8 247 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 ANKRD18BA2A2Z9 1011 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 UBE2HP62256 183 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
TOP3A-203ENST00000469739 SPATA32Q96LK8 384 aa11.12□□□□□ -0.63
TOP3A-203ENST00000469739 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
TOP3A-203ENST00000469739 FGAP02671 866 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 PCCAP05165 728 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-203ENST00000469739 KRT85P78386 507 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 ANKRD1Q15327 319 aa11.11□□□□□ -0.63
TOP3A-203ENST00000469739 ZMYM1Q5SVZ6 1142 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms