RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 C16orf71Q8IYS4 520 aaPredicted RBP10.61□□□□□ -0.71
SSBP1-208ENST00000469123 VGLL2Q8N8G2 317 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 LPIN2Q92539 896 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 AKAP2Q9Y2D5 859 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 ZBTB22O15209 634 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 TAF5LO75529 589 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 DDNO94850 711 aaPredicted RBP10.6□□□□□ -0.71
SSBP1-208ENST00000469123 CXCL9Q07325 125 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 G3BP1Q13283 466 aaKnown RBP eCLIP10.6□□□□□ -0.71
SSBP1-208ENST00000469123 LRRC24Q50LG9 513 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 CEP85Q6P2H3 762 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 SLC51AQ86UW1 340 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
SSBP1-208ENST00000469123 VPS37DQ86XT2 251 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
SSBP1-208ENST00000469123 AGBL3Q8NEM8 1001 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 DPF2Q92785 391 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 PUS3Q9BZE2 481 aaKnown RBP10.6□□□□□ -0.71
SSBP1-208ENST00000469123 DBNDD1Q9H9R9 158 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 HACL1Q9UJ83 578 aa10.6□□□□□ -0.71
SSBP1-208ENST00000469123 SCN9AQ15858 1988 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 PNMA6EA0A0J9YXQ4 647 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 YDJCA8MPS7 323 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 VIL1P09327 827 aaKnown RBP10.59□□□□□ -0.71
SSBP1-208ENST00000469123 IL1R1P14778 569 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 FKBP1AP62942 108 aaKnown RBP10.59□□□□□ -0.71
SSBP1-208ENST00000469123 STRIP1Q5VSL9 837 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
SSBP1-208ENST00000469123 KLHDC4Q8TBB5 520 aa10.59□□□□□ -0.71
SSBP1-208ENST00000469123 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
SSBP1-208ENST00000469123 NOP58Q9Y2X3 529 aaKnown RBP10.59□□□□□ -0.71
SSBP1-208ENST00000469123 IRS2Q9Y4H2 1338 aa10.58□□□□□ -0.71
SSBP1-208ENST00000469123 PSMD14O00487 310 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 KIF3CO14782 793 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 TOMM70O94826 608 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 FGFR2P21802 821 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 HIBADHP31937 336 aaKnown RBP10.58□□□□□ -0.72
SSBP1-208ENST00000469123 ATP2B3Q16720 1220 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 DOK7Q18PE1 504 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
SSBP1-208ENST00000469123 SIL1Q9H173 461 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 CD209Q9NNX6 404 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 NMRK2Q9NPI5 230 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 GPR108Q9NPR9 543 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 GNL3LQ9NVN8 582 aaKnown RBP10.58□□□□□ -0.72
SSBP1-208ENST00000469123 GJA3Q9Y6H8 435 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 ARAP2Q8WZ64 1704 aa10.58□□□□□ -0.72
SSBP1-208ENST00000469123 MYH13Q9UKX3 1938 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 H7C1D1 291 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 SEMA3EO15041 775 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 RAD17O75943 681 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 SASH1O94885 1247 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 OS9Q13438 667 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-208ENST00000469123 C20orf194Q5TEA3 1177 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-208ENST00000469123 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-208ENST00000469123 FBXO33Q7Z6M2 555 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 TBC1D22AQ8WUA7 517 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-208ENST00000469123 TAF1DQ9H5J8 278 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-208ENST00000469123 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 GPRC5DQ9NZD1 345 aa10.57□□□□□ -0.72
SSBP1-208ENST00000469123 PA2G4Q9UQ80 394 aaKnown RBP10.57□□□□□ -0.72
SSBP1-208ENST00000469123 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 SURF6O75683 361 aaKnown RBP10.56□□□□□ -0.72
SSBP1-208ENST00000469123 EPHX2P34913 555 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 GMPSP49915 693 aaPredicted RBP10.56□□□□□ -0.72
SSBP1-208ENST00000469123 SCNN1DP51172 638 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 FSTL1Q12841 308 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 LDHDQ86WU2 507 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 TDRD7Q8NHU6 1098 aaKnown RBP10.56□□□□□ -0.72
SSBP1-208ENST00000469123 FAM84BQ96KN1 310 aaPredicted RBP10.56□□□□□ -0.72
SSBP1-208ENST00000469123 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
SSBP1-208ENST00000469123 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 PDS5AQ29RF7 1337 aaKnown RBP10.56□□□□□ -0.72
SSBP1-208ENST00000469123 FAM205AQ6ZU69 1335 aa10.56□□□□□ -0.72
SSBP1-208ENST00000469123 POTECB2RU33 542 aa10.55□□□□□ -0.72
SSBP1-208ENST00000469123 IGSF3O75054 1194 aa10.55□□□□□ -0.72
SSBP1-208ENST00000469123 FRAT2O75474 233 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-208ENST00000469123 KLRK1P26718 216 aa10.55□□□□□ -0.72
SSBP1-208ENST00000469123 DACT2Q5SW24 774 aa10.55□□□□□ -0.72
SSBP1-208ENST00000469123 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
SSBP1-208ENST00000469123 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
SSBP1-208ENST00000469123 HDAC9Q9UKV0 1011 aa10.55□□□□□ -0.72
SSBP1-208ENST00000469123 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
SSBP1-208ENST00000469123 GYG1P46976 350 aa10.54□□□□□ -0.72
SSBP1-208ENST00000469123 TFCP2Q12800 502 aa10.54□□□□□ -0.72
SSBP1-208ENST00000469123 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
SSBP1-208ENST00000469123 WDR66Q8TBY9 1149 aa10.54□□□□□ -0.72
SSBP1-208ENST00000469123 KIF1BPQ96EK5 621 aa10.54□□□□□ -0.72
SSBP1-208ENST00000469123 GMLQ99445 158 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms