RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GMLQ99445 158 aa21.55■■□□□ 1.04
SSBP1-207ENST00000468267 USP44Q9H0E7 712 aa21.55■■□□□ 1.04
SSBP1-207ENST00000468267 MKRN1Q9UHC7 482 aaKnown RBP21.55■■□□□ 1.04
SSBP1-207ENST00000468267 NOB1Q9ULX3 412 aaKnown RBP21.55■■□□□ 1.04
SSBP1-207ENST00000468267 TRAF5O00463 557 aa21.54■■□□□ 1.04
SSBP1-207ENST00000468267 TAF5LO75529 589 aa21.54■■□□□ 1.04
SSBP1-207ENST00000468267 KLRK1P26718 216 aa21.54■■□□□ 1.04
SSBP1-207ENST00000468267 RARSP54136 660 aaKnown RBP21.54■■□□□ 1.04
SSBP1-207ENST00000468267 TBC1D10BQ4KMP7 808 aaPredicted RBP21.54■■□□□ 1.04
SSBP1-207ENST00000468267 HELBQ8NG08 1087 aaPredicted RBP21.54■■□□□ 1.04
SSBP1-207ENST00000468267 BICC1Q9H694 974 aaKnown RBP21.54■■□□□ 1.04
SSBP1-207ENST00000468267 CNTNAP1P78357 1384 aa21.53■■□□□ 1.04
SSBP1-207ENST00000468267 EGFRP00533 1210 aa21.53■■□□□ 1.04
SSBP1-207ENST00000468267 RABL6Q3YEC7 729 aaPredicted RBP21.53■■□□□ 1.04
SSBP1-207ENST00000468267 CNNM1Q9NRU3 951 aa21.53■■□□□ 1.04
SSBP1-207ENST00000468267 SNAP23O00161 211 aa21.52■■□□□ 1.04
SSBP1-207ENST00000468267 ZNF280AP59817 542 aaPredicted RBP21.52■■□□□ 1.04
SSBP1-207ENST00000468267 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
SSBP1-207ENST00000468267 CST9Q5W186 159 aa21.52■■□□□ 1.04
SSBP1-207ENST00000468267 C15orf52Q6ZUT6 534 aaKnown RBP21.52■■□□□ 1.04
SSBP1-207ENST00000468267 ANKRD44Q8N8A2 993 aa21.52■■□□□ 1.04
SSBP1-207ENST00000468267 GLIS2Q9BZE0 524 aaPredicted RBP21.52■■□□□ 1.04
SSBP1-207ENST00000468267 ZNF646O15015 1829 aaPredicted RBP21.52■■□□□ 1.04
SSBP1-207ENST00000468267 IRS2Q9Y4H2 1338 aa21.52■■□□□ 1.03
SSBP1-207ENST00000468267 DACT2Q5SW24 774 aa21.51■■□□□ 1.03
SSBP1-207ENST00000468267 STRIP1Q5VSL9 837 aa21.51■■□□□ 1.03
SSBP1-207ENST00000468267 CDC37L1Q7L3B6 337 aa21.51■■□□□ 1.03
SSBP1-207ENST00000468267 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
SSBP1-207ENST00000468267 USP17L8P0C7I0 530 aa21.5■■□□□ 1.03
SSBP1-207ENST00000468267 HNRNPUQ00839 825 aaKnown RBP eCLIP21.5■■□□□ 1.03
SSBP1-207ENST00000468267 KIF4BQ2VIQ3 1234 aa21.5■■□□□ 1.03
SSBP1-207ENST00000468267 RASSF10A6NK89 507 aa21.49■■□□□ 1.03
SSBP1-207ENST00000468267 PLIN1O60240 522 aa21.49■■□□□ 1.03
SSBP1-207ENST00000468267 PUS3Q9BZE2 481 aaKnown RBP21.49■■□□□ 1.03
SSBP1-207ENST00000468267 CD209Q9NNX6 404 aa21.49■■□□□ 1.03
SSBP1-207ENST00000468267 VEGFBP49765 207 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 DEFB115Q30KQ5 88 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 TTLL5Q6EMB2 1281 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 ARHGAP45Q92619 1136 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 FBXW7Q969H0 707 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 MXD3Q9BW11 206 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 ABT1Q9ULW3 272 aaKnown RBP21.48■■□□□ 1.03
SSBP1-207ENST00000468267 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
SSBP1-207ENST00000468267 CELF2O95319 508 aaKnown RBP21.47■■□□□ 1.03
SSBP1-207ENST00000468267 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
SSBP1-207ENST00000468267 MYOZ2Q9NPC6 264 aa21.47■■□□□ 1.03
SSBP1-207ENST00000468267 MYO3BQ8WXR4 1341 aa21.47■■□□□ 1.03
SSBP1-207ENST00000468267 KIF16BQ96L93 1317 aa21.47■■□□□ 1.03
SSBP1-207ENST00000468267 UBE4AQ14139 1066 aa21.46■■□□□ 1.03
SSBP1-207ENST00000468267 KRT26Q7Z3Y9 468 aa21.46■■□□□ 1.03
SSBP1-207ENST00000468267 ZNF804AQ7Z570 1209 aa21.46■■□□□ 1.03
SSBP1-207ENST00000468267 IL1R1P14778 569 aa21.45■■□□□ 1.02
SSBP1-207ENST00000468267 MMP14P50281 582 aa21.45■■□□□ 1.02
SSBP1-207ENST00000468267 GTF2IP78347 998 aa21.45■■□□□ 1.02
SSBP1-207ENST00000468267 SCARF1Q14162 830 aa21.45■■□□□ 1.02
SSBP1-207ENST00000468267 TLL2Q9Y6L7 1015 aa21.45■■□□□ 1.02
SSBP1-207ENST00000468267 MROH5Q6ZUA9 1318 aa21.45■■□□□ 1.02
SSBP1-207ENST00000468267 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
SSBP1-207ENST00000468267 LRRC24Q50LG9 513 aa21.44■■□□□ 1.02
SSBP1-207ENST00000468267 OGFOD1Q8N543 542 aa21.44■■□□□ 1.02
SSBP1-207ENST00000468267 ASTN2O75129 1339 aaPredicted RBP21.44■■□□□ 1.02
SSBP1-207ENST00000468267 INTS3Q68E01 1043 aaKnown RBP21.43■■□□□ 1.02
SSBP1-207ENST00000468267 DLK2Q6UY11 383 aa21.43■■□□□ 1.02
SSBP1-207ENST00000468267 GGA3Q9NZ52 723 aa21.43■■□□□ 1.02
SSBP1-207ENST00000468267 ADM5C9JUS6 153 aa21.42■■□□□ 1.02
SSBP1-207ENST00000468267 IPO8O15397 1037 aaKnown RBP21.42■■□□□ 1.02
SSBP1-207ENST00000468267 BCAR3O75815 825 aa21.42■■□□□ 1.02
SSBP1-207ENST00000468267 HSPA1AP0DMV8 641 aaKnown RBP21.42■■□□□ 1.02
SSBP1-207ENST00000468267 HSPA1BP0DMV9 641 aaKnown RBP21.42■■□□□ 1.02
SSBP1-207ENST00000468267 SAPCD2Q86UD0 394 aa21.42■■□□□ 1.02
SSBP1-207ENST00000468267 KLHDC4Q8TBB5 520 aa21.42■■□□□ 1.02
SSBP1-207ENST00000468267 WDR33Q9C0J8 1336 aaKnown RBP21.42■■□□□ 1.02
SSBP1-207ENST00000468267 ZNF408Q9H9D4 720 aa21.42■■□□□ 1.02
SSBP1-207ENST00000468267 RFX5P48382 616 aaPredicted RBP21.41■■□□□ 1.02
SSBP1-207ENST00000468267 METTL24Q5JXM2 366 aa21.41■■□□□ 1.02
SSBP1-207ENST00000468267 ANGEL2Q5VTE6 544 aaKnown RBP21.41■■□□□ 1.02
SSBP1-207ENST00000468267 SULF1Q8IWU6 871 aa21.41■■□□□ 1.02
SSBP1-207ENST00000468267 HDAC5Q9UQL6 1122 aa21.41■■□□□ 1.02
SSBP1-207ENST00000468267 PITPNM2Q9BZ72 1349 aa21.4■■□□□ 1.02
SSBP1-207ENST00000468267 KIAA0825Q8IV33 1275 aa21.4■■□□□ 1.02
SSBP1-207ENST00000468267 VGLL2Q8N8G2 317 aa21.4■■□□□ 1.02
SSBP1-207ENST00000468267 FAM84BQ96KN1 310 aaPredicted RBP21.4■■□□□ 1.02
SSBP1-207ENST00000468267 SASH1O94885 1247 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 PDE8BO95263 885 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 HIBADHP31937 336 aaKnown RBP21.39■■□□□ 1.01
SSBP1-207ENST00000468267 ECE1P42892 770 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 GYG1P46976 350 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 FKBP1AP62942 108 aaKnown RBP21.39■■□□□ 1.01
SSBP1-207ENST00000468267 PTPN12Q05209 780 aaKnown RBP21.39■■□□□ 1.01
SSBP1-207ENST00000468267 NBPF9Q3BBW0 867 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 ATF7IPQ6VMQ6 1270 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 CERS5Q8N5B7 392 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 TDRD7Q8NHU6 1098 aaKnown RBP21.39■■□□□ 1.01
SSBP1-207ENST00000468267 HHIPL1Q96JK4 782 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 CAPNS2Q96L46 248 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 MEIS3Q99687 375 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 HDAC9Q9UKV0 1011 aa21.39■■□□□ 1.01
SSBP1-207ENST00000468267 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.01
SSBP1-207ENST00000468267 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms