RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
PTMA-211ENST00000468027 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
PTMA-211ENST00000468027 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
PTMA-211ENST00000468027 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
PTMA-211ENST00000468027 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
PTMA-211ENST00000468027 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
PTMA-211ENST00000468027 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
PTMA-211ENST00000468027 COA1Q9GZY4 146 aa16.3■□□□□ 0.2
PTMA-211ENST00000468027 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
PTMA-211ENST00000468027 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
PTMA-211ENST00000468027 EGFRP00533 1210 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
PTMA-211ENST00000468027 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
PTMA-211ENST00000468027 MTX1Q13505 466 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 DACT2Q5SW24 774 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 DNAJC5GQ8N7S2 189 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 CNNM1Q9NRU3 951 aa16.29■□□□□ 0.2
PTMA-211ENST00000468027 MROH5Q6ZUA9 1318 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 IL1R1P14778 569 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 APLP1P51693 650 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 UBE4AQ14139 1066 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 EAPPQ56P03 285 aaPredicted RBP16.28■□□□□ 0.2
PTMA-211ENST00000468027 TAF7LQ5H9L4 462 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 RSBN1LQ6PCB5 846 aaPredicted RBP16.28■□□□□ 0.2
PTMA-211ENST00000468027 MICALL2Q8IY33 904 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 TRPM4Q8TD43 1214 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
PTMA-211ENST00000468027 USP17L3A6NCW0 530 aa16.27■□□□□ 0.2
PTMA-211ENST00000468027 USP17L4A6NCW7 530 aa16.27■□□□□ 0.2
PTMA-211ENST00000468027 FGFR2P21802 821 aa16.27■□□□□ 0.2
PTMA-211ENST00000468027 ZNF280AP59817 542 aaPredicted RBP16.27■□□□□ 0.2
PTMA-211ENST00000468027 USP17L1Q7RTZ2 530 aa16.27■□□□□ 0.2
PTMA-211ENST00000468027 AGBL3Q8NEM8 1001 aa16.27■□□□□ 0.2
PTMA-211ENST00000468027 EYA2O00167 538 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 PDE8BO95263 885 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 GNAI3P08754 354 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 HTRA3P83110 453 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
PTMA-211ENST00000468027 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 COPRSQ9NQ92 184 aa16.26■□□□□ 0.19
PTMA-211ENST00000468027 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
PTMA-211ENST00000468027 PLIN1O60240 522 aa16.25■□□□□ 0.19
PTMA-211ENST00000468027 DZIP1LQ8IYY4 767 aaKnown RBP16.25■□□□□ 0.19
PTMA-211ENST00000468027 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
PTMA-211ENST00000468027 MXD3Q9BW11 206 aa16.25■□□□□ 0.19
PTMA-211ENST00000468027 FBXO3Q9UK99 471 aa16.25■□□□□ 0.19
PTMA-211ENST00000468027 G3V3G9 751 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 H7C1D1 291 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 CIAO1O76071 339 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 KCNJ4P48050 445 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 FBXO33Q7Z6M2 555 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 ZC3H15Q8WU90 426 aaKnown RBP16.24■□□□□ 0.19
PTMA-211ENST00000468027 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
PTMA-211ENST00000468027 AKAP11Q9UKA4 1901 aa16.23■□□□□ 0.19
PTMA-211ENST00000468027 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
PTMA-211ENST00000468027 FMR1Q06787 632 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTMA-211ENST00000468027 TTLL5Q6EMB2 1281 aa16.23■□□□□ 0.19
PTMA-211ENST00000468027 CERS5Q8N5B7 392 aa16.23■□□□□ 0.19
PTMA-211ENST00000468027 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
PTMA-211ENST00000468027 PA2G4Q9UQ80 394 aaKnown RBP16.23■□□□□ 0.19
PTMA-211ENST00000468027 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
PTMA-211ENST00000468027 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
PTMA-211ENST00000468027 GNAI2P04899 355 aa16.22■□□□□ 0.19
PTMA-211ENST00000468027 GYG1P46976 350 aa16.22■□□□□ 0.19
PTMA-211ENST00000468027 TBC1D10BQ4KMP7 808 aaPredicted RBP16.22■□□□□ 0.19
PTMA-211ENST00000468027 METTL24Q5JXM2 366 aa16.22■□□□□ 0.19
PTMA-211ENST00000468027 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
PTMA-211ENST00000468027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.22■□□□□ 0.19
PTMA-211ENST00000468027 FAM205AQ6ZU69 1335 aa16.21■□□□□ 0.19
PTMA-211ENST00000468027 MYO3BQ8WXR4 1341 aa16.21■□□□□ 0.19
PTMA-211ENST00000468027 SASH1O94885 1247 aa16.21■□□□□ 0.19
PTMA-211ENST00000468027 FKBP1AP62942 108 aaKnown RBP16.21■□□□□ 0.19
PTMA-211ENST00000468027 GTF2IP78347 998 aa16.21■□□□□ 0.19
PTMA-211ENST00000468027 ZNF804AQ7Z570 1209 aa16.21■□□□□ 0.19
PTMA-211ENST00000468027 PANK1Q8TE04 598 aa16.21■□□□□ 0.19
PTMA-211ENST00000468027 ZBED3Q96IU2 234 aaPredicted RBP16.21■□□□□ 0.19
PTMA-211ENST00000468027 THSD7BQ9C0I4 1608 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 POLA2Q14181 598 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 CST9Q5W186 159 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 SIL1Q9H173 461 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
PTMA-211ENST00000468027 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
PTMA-211ENST00000468027 MYH2Q9UKX2 1941 aa16.19■□□□□ 0.18
PTMA-211ENST00000468027 COL1A1P02452 1464 aaPredicted RBP16.19■□□□□ 0.18
PTMA-211ENST00000468027 TRAF5O00463 557 aa16.19■□□□□ 0.18
PTMA-211ENST00000468027 ZBTB22O15209 634 aa16.19■□□□□ 0.18
PTMA-211ENST00000468027 HIBADHP31937 336 aaKnown RBP16.19■□□□□ 0.18
PTMA-211ENST00000468027 IL15P40933 162 aaPredicted RBP16.19■□□□□ 0.18
PTMA-211ENST00000468027 MMP14P50281 582 aa16.19■□□□□ 0.18
PTMA-211ENST00000468027 PUM3Q15397 648 aaKnown RBP16.19■□□□□ 0.18
PTMA-211ENST00000468027 KIF4BQ2VIQ3 1234 aa16.19■□□□□ 0.18
PTMA-211ENST00000468027 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms