RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	CELF1	Q92879	486 aa	Known RBP	13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	USP26	Q9BXU7	913 aa		13.33	□□□□□ -0.28
MUC1-216	ENST00000467134	MED23	Q9ULK4	1368 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	ZFY	P08048	801 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	MMP10	P09238	476 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	ADORA1	P30542	326 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	PDE6B	P35913	854 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	ANAPC15	P60006	121 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	FSD1	Q9BTV5	496 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	LEMD3	Q9Y2U8	911 aa		13.32	□□□□□ -0.28
MUC1-216	ENST00000467134	MSH5	O43196	834 aa		13.31	□□□□□ -0.28
MUC1-216	ENST00000467134	CCDC102B	Q68D86	513 aa		13.31	□□□□□ -0.28
MUC1-216	ENST00000467134	IPO9	Q96P70	1041 aa	Known RBP	13.31	□□□□□ -0.28
MUC1-216	ENST00000467134	C10orf71	Q711Q0	1435 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	NPR1	P16066	1061 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	MCC	P23508	829 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	ZSCAN25	Q6NSZ9	544 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	HELLS	Q9NRZ9	838 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	GNL3L	Q9NVN8	582 aa	Known RBP	13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	PODXL2	Q9NZ53	605 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	XDH	P47989	1333 aa		13.3	□□□□□ -0.28
MUC1-216	ENST00000467134	CCDC88A	Q3V6T2	1871 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	MAP4K4	O95819	1239 aa	Predicted RBP	13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	SRGN	P10124	158 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	ALDH1B1	P30837	517 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	STYK1	Q6J9G0	422 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	DEFB132	Q7Z7B7	95 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	DNAJC2	Q99543	621 aa	Known RBP	13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	IRS2	Q9Y4H2	1338 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	CACNA1S	Q13698	1873 aa		13.29	□□□□□ -0.28
MUC1-216	ENST00000467134	GOLIM4	O00461	696 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	TAF5L	O75529	589 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	MCAM	P43121	646 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	PHKA1	P46020	1223 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	NMI	Q13287	307 aa	Predicted RBP	13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	CAVIN4	Q5BKX8	364 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	ZMYM1	Q5SVZ6	1142 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	KIAA1211	Q6ZU35	1233 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	FBXO33	Q7Z6M2	555 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	SP8	Q8IXZ3	490 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	HELB	Q8NG08	1087 aa	Predicted RBP	13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	SNX21	Q969T3	373 aa		13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	LSG1	Q9H089	658 aa	Known RBP	13.28	□□□□□ -0.28
MUC1-216	ENST00000467134	RNF113A	O15541	343 aa	Known RBP	13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	ATP2B4	P23634	1241 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	BECN1	Q14457	450 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	RABEP1	Q15276	862 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	CWC27	Q6UX04	472 aa	Known RBP	13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	SPATA5	Q8NB90	893 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	KCNB2	Q92953	911 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	MASTL	Q96GX5	879 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	KIF2C	Q99661	725 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	ANO2	Q9NQ90	1003 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	CCDC171	Q6TFL3	1326 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134	LAMA4	Q16363	1823 aa		13.27	□□□□□ -0.29
MUC1-216	ENST00000467134		A0A0D9SFI3	127 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	HSPA4	P34932	840 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	ZAP70	P43403	619 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	KCNJ4	P48050	445 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	RASGRF1	Q13972	1273 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	SCARF1	Q14162	830 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	UBE3C	Q15386	1083 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	MCMDC2	Q4G0Z9	681 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	CCDC24	Q8N4L8	307 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	HMG20B	Q9P0W2	317 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	DENND2A	Q9ULE3	1009 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	ATP6V0A2	Q9Y487	856 aa		13.26	□□□□□ -0.29
MUC1-216	ENST00000467134	GRIPAP1	Q4V328	841 aa		13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	APPBP2	Q92624	585 aa		13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	MAP4K1	Q92918	833 aa		13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	EDC3	Q96F86	508 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	FAM84B	Q96KN1	310 aa	Predicted RBP	13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	FAM227B	Q96M60	508 aa		13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	BRCA1	P38398	1863 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-216	ENST00000467134	SALL1	Q9NSC2	1324 aa		13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	PPEF1	O14829	653 aa	Predicted RBP	13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	CYP2E1	P05181	493 aa	Predicted RBP	13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	HIBADH	P31937	336 aa	Known RBP	13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	CC2D2B	Q6DHV5	1058 aa		13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	IL25	Q9H293	177 aa		13.24	□□□□□ -0.29
MUC1-216	ENST00000467134	COL1A1	P02452	1464 aa	Predicted RBP	13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	SLX4	Q8IY92	1834 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134		H0YIN7	160 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	ADD2	P35612	726 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	BCAM	P50895	628 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	MAP3K12	Q12852	859 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	TSGA10IP	Q3SY00	556 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	MSL1	Q68DK7	614 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	ZNF804A	Q7Z570	1209 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	CNKSR1	Q969H4	720 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	DSCC1	Q9BVC3	393 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	ANTXR1	Q9H6X2	564 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	GGA1	Q9UJY5	639 aa		13.23	□□□□□ -0.29
MUC1-216	ENST00000467134		U3KPZ7	1027 aa	Predicted RBP	13.23	□□□□□ -0.29
MUC1-216	ENST00000467134	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.22	□□□□□ -0.29
MUC1-216	ENST00000467134	MAST3	O60307	1309 aa		13.22	□□□□□ -0.29
MUC1-216	ENST00000467134	GPSM2	P81274	684 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms