RNA–Protein interactions for RNA: ENST00000466243.1

SLC6A8-207, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-207ENST00000466243 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
SLC6A8-207ENST00000466243 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
SLC6A8-207ENST00000466243 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLC6A8-207ENST00000466243 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
SLC6A8-207ENST00000466243 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
SLC6A8-207ENST00000466243 JMYQ8N9B5 988 aa17.16■□□□□ 0.34
SLC6A8-207ENST00000466243 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-207ENST00000466243 PGAP2Q9UHJ9 254 aa17.16■□□□□ 0.34
SLC6A8-207ENST00000466243 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
SLC6A8-207ENST00000466243 EGFRP00533 1210 aa17.15■□□□□ 0.34
SLC6A8-207ENST00000466243 ABT1Q9ULW3 272 aaKnown RBP17.15■□□□□ 0.34
SLC6A8-207ENST00000466243 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 UBTFL1P0CB47 393 aaPredicted RBP17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 STRIP1Q5VSL9 837 aa17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 CDC37L1Q7L3B6 337 aa17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 MXD3Q9BW11 206 aa17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
SLC6A8-207ENST00000466243 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 DACT2Q5SW24 774 aa17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 GMLQ99445 158 aa17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
SLC6A8-207ENST00000466243 BCAR3O75815 825 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 GTF2IP78347 998 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 DCPSQ96C86 337 aaKnown RBP17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 ZNF408Q9H9D4 720 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 RIPOR2Q9Y4F9 1068 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 ZNF609O15014 1411 aa17.12■□□□□ 0.33
SLC6A8-207ENST00000466243 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 METTL24Q5JXM2 366 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 CST9Q5W186 159 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 KRT26Q7Z3Y9 468 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 OGFOD1Q8N543 542 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 KLHDC4Q8TBB5 520 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 MYOZ2Q9NPC6 264 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 IRS2Q9Y4H2 1338 aa17.11■□□□□ 0.33
SLC6A8-207ENST00000466243 MYH3P11055 1940 aa17.1■□□□□ 0.33
SLC6A8-207ENST00000466243 SCARF1Q14162 830 aa17.1■□□□□ 0.33
SLC6A8-207ENST00000466243 DEFB115Q30KQ5 88 aa17.1■□□□□ 0.33
SLC6A8-207ENST00000466243 RASSF10A6NK89 507 aa17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 TRIM27P14373 513 aa17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 VEGFBP49765 207 aa17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 PAXIP1Q6ZW49 1069 aaPredicted RBP17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
SLC6A8-207ENST00000466243 ADM5C9JUS6 153 aa17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 IL1R1P14778 569 aa17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 ANGEL2Q5VTE6 544 aaKnown RBP17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 HDAC9Q9UKV0 1011 aa17.08■□□□□ 0.32
SLC6A8-207ENST00000466243 HIBADHP31937 336 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-207ENST00000466243 GYG1P46976 350 aa17.07■□□□□ 0.32
SLC6A8-207ENST00000466243 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
SLC6A8-207ENST00000466243 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
SLC6A8-207ENST00000466243 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
SLC6A8-207ENST00000466243 TLL2Q9Y6L7 1015 aa17.07■□□□□ 0.32
SLC6A8-207ENST00000466243 EYA2O00167 538 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 PDE8BO95263 885 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 GNAI3P08754 354 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 MMP14P50281 582 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 SCN9AQ15858 1988 aa17.06■□□□□ 0.32
SLC6A8-207ENST00000466243 GRM1Q13255 1194 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 NBPF9Q3BBW0 867 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 CAVIN4Q5BKX8 364 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 SAPCD2Q86UD0 394 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 SIL1Q9H173 461 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
SLC6A8-207ENST00000466243 WDR33Q9C0J8 1336 aaKnown RBP17.04■□□□□ 0.32
SLC6A8-207ENST00000466243 F8W031 263 aaPredicted RBP17.04■□□□□ 0.32
SLC6A8-207ENST00000466243 WNT10BO00744 389 aa17.04■□□□□ 0.32
SLC6A8-207ENST00000466243 SASH1O94885 1247 aa17.04■□□□□ 0.32
SLC6A8-207ENST00000466243 ECE1P42892 770 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms