RNA–Protein interactions for RNA: ENST00000463378.5

RBBP4-208, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-208ENST00000463378 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
RBBP4-208ENST00000463378 CTC1Q2NKJ3 1217 aa8.69□□□□□ -1.02
RBBP4-208ENST00000463378 SNAP47Q5SQN1 464 aa8.69□□□□□ -1.02
RBBP4-208ENST00000463378 TCF12Q99081 682 aa8.69□□□□□ -1.02
RBBP4-208ENST00000463378 TRIM55Q9BYV6 548 aa8.69□□□□□ -1.02
RBBP4-208ENST00000463378 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
RBBP4-208ENST00000463378 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
RBBP4-208ENST00000463378 MMRN1Q13201 1228 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 RHOVQ96L33 236 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 ZNF408Q9H9D4 720 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 ZFATQ9P243 1243 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 PDZRN3Q9UPQ7 1066 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 TBX22Q9Y458 520 aa8.68□□□□□ -1.02
RBBP4-208ENST00000463378 K7ELQ4 463 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-208ENST00000463378 MAN1A2O60476 641 aa8.67□□□□□ -1.02
RBBP4-208ENST00000463378 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
RBBP4-208ENST00000463378 AVPP01185 164 aa8.67□□□□□ -1.02
RBBP4-208ENST00000463378 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
RBBP4-208ENST00000463378 ZNF746Q6NUN9 644 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-208ENST00000463378 PHC3Q8NDX5 983 aa8.67□□□□□ -1.02
RBBP4-208ENST00000463378 EAF1Q96JC9 268 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-208ENST00000463378 GINM1Q9NU53 330 aa8.67□□□□□ -1.02
RBBP4-208ENST00000463378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-208ENST00000463378 MAPTP10636 758 aaKnown RBP8.66□□□□□ -1.02
RBBP4-208ENST00000463378 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
RBBP4-208ENST00000463378 ITPKAP23677 461 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 SOX9P48436 509 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 MAP3K10Q02779 954 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 LMNB2Q03252 620 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 TNP2Q05952 138 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 APOBRQ0VD83 1088 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 TTBK2Q6IQ55 1244 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 FBXL19Q6PCT2 694 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
RBBP4-208ENST00000463378 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 BHMTQ93088 406 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 MKL1Q969V6 931 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 KCNQ5Q9NR82 932 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 SAMM50Q9Y512 469 aa8.66□□□□□ -1.02
RBBP4-208ENST00000463378 PF4P02776 101 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 CELA3AP09093 270 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 CAMK2GQ13555 558 aaPredicted RBP8.65□□□□□ -1.02
RBBP4-208ENST00000463378 ANKS3Q6ZW76 656 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 GOLM1Q8NBJ4 401 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 NKD1Q969G9 470 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
RBBP4-208ENST00000463378 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
RBBP4-208ENST00000463378 RBSNQ9H1K0 784 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 DZANK1Q9NVP4 752 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 GPN3Q9UHW5 284 aaPredicted RBP8.65□□□□□ -1.02
RBBP4-208ENST00000463378 TLR6Q9Y2C9 796 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 MRVI1Q9Y6F6 885 aa8.65□□□□□ -1.02
RBBP4-208ENST00000463378 GRIA4P48058 902 aa8.64□□□□□ -1.03
RBBP4-208ENST00000463378 NRLP54845 237 aa8.64□□□□□ -1.03
RBBP4-208ENST00000463378 RPS26P62854 115 aaKnown RBP8.64□□□□□ -1.03
RBBP4-208ENST00000463378 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
RBBP4-208ENST00000463378 CEP120Q8N960 986 aa8.64□□□□□ -1.03
RBBP4-208ENST00000463378 TMEM102Q8N9M5 508 aaPredicted RBP8.64□□□□□ -1.03
RBBP4-208ENST00000463378 ASAP3Q8TDY4 903 aa8.64□□□□□ -1.03
RBBP4-208ENST00000463378 NECAB3Q96P71 396 aaPredicted RBP8.64□□□□□ -1.03
RBBP4-208ENST00000463378 ROBO2Q9HCK4 1378 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 A0A096LPE4 126 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 GREM1O60565 184 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 ACPPP15309 386 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
RBBP4-208ENST00000463378 PPP2R3AQ06190 1150 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 SERINC3Q13530 473 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 PCSK7Q16549 785 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 COL13A1Q5TAT6 717 aaPredicted RBP8.63□□□□□ -1.03
RBBP4-208ENST00000463378 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 SRPK1Q96SB4 655 aaKnown RBP8.63□□□□□ -1.03
RBBP4-208ENST00000463378 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
RBBP4-208ENST00000463378 UBP1Q9NZI7 540 aa8.63□□□□□ -1.03
RBBP4-208ENST00000463378 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.63□□□□□ -1.03
RBBP4-208ENST00000463378 PDE2AO00408 941 aaPredicted RBP8.62□□□□□ -1.03
RBBP4-208ENST00000463378 AXIN1O15169 862 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 GHRHP01286 108 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 ETFBP38117 255 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 TNNI3KQ59H18 835 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 PCNX4Q63HM2 1172 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 EGFLAMQ63HQ2 1017 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 GMCL1Q96IK5 515 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 STRN4Q9NRL3 753 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
RBBP4-208ENST00000463378 ENC1O14682 589 aa8.61□□□□□ -1.03
RBBP4-208ENST00000463378 BNIP3LO60238 219 aa8.61□□□□□ -1.03
RBBP4-208ENST00000463378 GPLD1P80108 840 aa8.61□□□□□ -1.03
RBBP4-208ENST00000463378 SPRED3Q2MJR0 410 aa8.61□□□□□ -1.03
RBBP4-208ENST00000463378 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms