RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
VPS45-204ENST00000460366 ZBTB40Q9NUA8 1239 aa12.41□□□□□ -0.42
VPS45-204ENST00000460366 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
VPS45-204ENST00000460366 LTBP3Q9NS15 1303 aa12.4□□□□□ -0.42
VPS45-204ENST00000460366 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
VPS45-204ENST00000460366 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
VPS45-204ENST00000460366 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
VPS45-204ENST00000460366 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
VPS45-204ENST00000460366 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.42
VPS45-204ENST00000460366 MYH3P11055 1940 aa12.4□□□□□ -0.42
VPS45-204ENST00000460366 RFX5P48382 616 aaPredicted RBP12.39□□□□□ -0.43
VPS45-204ENST00000460366 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
VPS45-204ENST00000460366 AAMPQ13685 434 aa12.39□□□□□ -0.43
VPS45-204ENST00000460366 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
VPS45-204ENST00000460366 PSMD1Q99460 953 aa12.39□□□□□ -0.43
VPS45-204ENST00000460366 RTFDC1Q9BY42 306 aaPredicted RBP12.39□□□□□ -0.43
VPS45-204ENST00000460366 ARFGEF1Q9Y6D6 1849 aa12.39□□□□□ -0.43
VPS45-204ENST00000460366 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS45-204ENST00000460366 MPNDQ8N594 471 aa12.38□□□□□ -0.43
VPS45-204ENST00000460366 VPS33BQ9H267 617 aa12.38□□□□□ -0.43
VPS45-204ENST00000460366 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
VPS45-204ENST00000460366 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 NFKBIEO00221 500 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
VPS45-204ENST00000460366 PTPN12Q05209 780 aaKnown RBP12.37□□□□□ -0.43
VPS45-204ENST00000460366 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
VPS45-204ENST00000460366 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 COPRSQ9NQ92 184 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 MINPP1Q9UNW1 487 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
VPS45-204ENST00000460366 KIF3CO14782 793 aa12.36□□□□□ -0.43
VPS45-204ENST00000460366 CIAO1O76071 339 aa12.36□□□□□ -0.43
VPS45-204ENST00000460366 OLFM4Q6UX06 510 aa12.36□□□□□ -0.43
VPS45-204ENST00000460366 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
VPS45-204ENST00000460366 SSH3Q8TE77 659 aa12.36□□□□□ -0.43
VPS45-204ENST00000460366 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
VPS45-204ENST00000460366 XDHP47989 1333 aa12.36□□□□□ -0.43
VPS45-204ENST00000460366 PNMA6EA0A0J9YXQ4 647 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 EYA2O00167 538 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 LMNB1P20700 586 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 GPSM2P81274 684 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 CEP85Q6P2H3 762 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 CNNM1Q9NRU3 951 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 GGA1Q9UJY5 639 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
VPS45-204ENST00000460366 LEMD3Q9Y2U8 911 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 MROH5Q6ZUA9 1318 aa12.35□□□□□ -0.43
VPS45-204ENST00000460366 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
VPS45-204ENST00000460366 CHRNDQ07001 517 aa12.34□□□□□ -0.43
VPS45-204ENST00000460366 TBC1D16Q8TBP0 767 aa12.34□□□□□ -0.43
VPS45-204ENST00000460366 CRBNQ96SW2 442 aa12.34□□□□□ -0.43
VPS45-204ENST00000460366 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
VPS45-204ENST00000460366 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
VPS45-204ENST00000460366 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
VPS45-204ENST00000460366 TAF1P21675 1872 aa12.34□□□□□ -0.43
VPS45-204ENST00000460366 COL4A1P02462 1669 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 HMMRO75330 724 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 IL15P40933 162 aaPredicted RBP12.33□□□□□ -0.44
VPS45-204ENST00000460366 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 EYA3Q99504 573 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 FER1L6Q2WGJ9 1857 aa12.33□□□□□ -0.44
VPS45-204ENST00000460366 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 UFL1O94874 794 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
VPS45-204ENST00000460366 RASSF7Q02833 373 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 KIAA2012Q0VF49 1180 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 UBE4AQ14139 1066 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 C15orf52Q6ZUT6 534 aaKnown RBP12.32□□□□□ -0.44
VPS45-204ENST00000460366 ATG9AQ7Z3C6 839 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
VPS45-204ENST00000460366 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
VPS45-204ENST00000460366 PA2G4Q9UQ80 394 aaKnown RBP12.32□□□□□ -0.44
VPS45-204ENST00000460366 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
VPS45-204ENST00000460366 PDE8BO95263 885 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 PRELPP51888 382 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 G3BP1Q13283 466 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS45-204ENST00000460366 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 HSP90AB4PQ58FF6 505 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 METTL24Q5JXM2 366 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 VGLL2Q8N8G2 317 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 ZC3H12CQ9C0D7 883 aaKnown RBP12.31□□□□□ -0.44
VPS45-204ENST00000460366 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 ZNF804BA4D1E1 1349 aa12.31□□□□□ -0.44
VPS45-204ENST00000460366 PPIP5K2O43314 1243 aa12.3□□□□□ -0.44
VPS45-204ENST00000460366 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms