RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 COA1Q9GZY4 146 aa23.9■■□□□ 1.42
COL5A1-203ENST00000460264 KCNJ4P48050 445 aa23.89■■□□□ 1.41
COL5A1-203ENST00000460264 VEGFBP49765 207 aa23.89■■□□□ 1.41
COL5A1-203ENST00000460264 ZNF280AP59817 542 aaPredicted RBP23.89■■□□□ 1.41
COL5A1-203ENST00000460264 KIF4BQ2VIQ3 1234 aa23.89■■□□□ 1.41
COL5A1-203ENST00000460264 ZNF594Q96JF6 807 aaPredicted RBP23.89■■□□□ 1.41
COL5A1-203ENST00000460264 THSD7BQ9C0I4 1608 aa23.88■■□□□ 1.41
COL5A1-203ENST00000460264 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
COL5A1-203ENST00000460264 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
COL5A1-203ENST00000460264 DEFB115Q30KQ5 88 aa23.88■■□□□ 1.41
COL5A1-203ENST00000460264 TAF7LQ5H9L4 462 aa23.88■■□□□ 1.41
COL5A1-203ENST00000460264 RBM26Q5T8P6 1007 aaKnown RBP23.88■■□□□ 1.41
COL5A1-203ENST00000460264 CDC37L1Q7L3B6 337 aa23.88■■□□□ 1.41
COL5A1-203ENST00000460264 IRS2Q9Y4H2 1338 aa23.87■■□□□ 1.41
COL5A1-203ENST00000460264 TAF5LO75529 589 aa23.87■■□□□ 1.41
COL5A1-203ENST00000460264 DACT2Q5SW24 774 aa23.87■■□□□ 1.41
COL5A1-203ENST00000460264 DIEXFQ68CQ4 756 aaKnown RBP23.87■■□□□ 1.41
COL5A1-203ENST00000460264 MIER1Q8N108 512 aa23.87■■□□□ 1.41
COL5A1-203ENST00000460264 HELBQ8NG08 1087 aaPredicted RBP23.87■■□□□ 1.41
COL5A1-203ENST00000460264 SNAP23O00161 211 aa23.86■■□□□ 1.41
COL5A1-203ENST00000460264 CELF2O95319 508 aaKnown RBP23.86■■□□□ 1.41
COL5A1-203ENST00000460264 LDHAL6AQ6ZMR3 332 aa23.86■■□□□ 1.41
COL5A1-203ENST00000460264 BICC1Q9H694 974 aaKnown RBP23.86■■□□□ 1.41
COL5A1-203ENST00000460264 USP17L8P0C7I0 530 aa23.85■■□□□ 1.41
COL5A1-203ENST00000460264 RABL6Q3YEC7 729 aaPredicted RBP23.85■■□□□ 1.41
COL5A1-203ENST00000460264 STRIP1Q5VSL9 837 aa23.85■■□□□ 1.41
COL5A1-203ENST00000460264 C15orf52Q6ZUT6 534 aaKnown RBP23.85■■□□□ 1.41
COL5A1-203ENST00000460264 CNNM1Q9NRU3 951 aa23.85■■□□□ 1.41
COL5A1-203ENST00000460264 TLL2Q9Y6L7 1015 aa23.85■■□□□ 1.41
COL5A1-203ENST00000460264 KRT26Q7Z3Y9 468 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 USP48Q86UV5 1035 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 ANKRD44Q8N8A2 993 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 FBXW7Q969H0 707 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 MXD3Q9BW11 206 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 USP44Q9H0E7 712 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
COL5A1-203ENST00000460264 DCPSQ96C86 337 aaKnown RBP23.83■■□□□ 1.41
COL5A1-203ENST00000460264 ZNF408Q9H9D4 720 aa23.83■■□□□ 1.41
COL5A1-203ENST00000460264 MYOZ2Q9NPC6 264 aa23.83■■□□□ 1.41
COL5A1-203ENST00000460264 GGA3Q9NZ52 723 aa23.83■■□□□ 1.41
COL5A1-203ENST00000460264 ASTN2O75129 1339 aaPredicted RBP23.83■■□□□ 1.4
COL5A1-203ENST00000460264 WDR33Q9C0J8 1336 aaKnown RBP23.83■■□□□ 1.4
COL5A1-203ENST00000460264 BRPF1P55201 1214 aaPredicted RBP23.82■■□□□ 1.4
COL5A1-203ENST00000460264 DLK2Q6UY11 383 aa23.82■■□□□ 1.4
COL5A1-203ENST00000460264 CD209Q9NNX6 404 aa23.82■■□□□ 1.4
COL5A1-203ENST00000460264 ADM5C9JUS6 153 aa23.81■■□□□ 1.4
COL5A1-203ENST00000460264 SAPCD2Q86UD0 394 aa23.81■■□□□ 1.4
COL5A1-203ENST00000460264 PUS3Q9BZE2 481 aaKnown RBP23.81■■□□□ 1.4
COL5A1-203ENST00000460264 NOB1Q9ULX3 412 aaKnown RBP23.81■■□□□ 1.4
COL5A1-203ENST00000460264 PLIN1O60240 522 aa23.8■■□□□ 1.4
COL5A1-203ENST00000460264 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
COL5A1-203ENST00000460264 TTLL5Q6EMB2 1281 aa23.8■■□□□ 1.4
COL5A1-203ENST00000460264 CAPNS2Q96L46 248 aa23.8■■□□□ 1.4
COL5A1-203ENST00000460264 GTF2IP78347 998 aa23.79■■□□□ 1.4
COL5A1-203ENST00000460264 SCARF1Q14162 830 aa23.79■■□□□ 1.4
COL5A1-203ENST00000460264 PAXIP1Q6ZW49 1069 aaPredicted RBP23.79■■□□□ 1.4
COL5A1-203ENST00000460264 ZNF804AQ7Z570 1209 aa23.79■■□□□ 1.4
COL5A1-203ENST00000460264 SULF1Q8IWU6 871 aa23.79■■□□□ 1.4
COL5A1-203ENST00000460264 ECE1P42892 770 aa23.78■■□□□ 1.4
COL5A1-203ENST00000460264 ANGEL2Q5VTE6 544 aaKnown RBP23.78■■□□□ 1.4
COL5A1-203ENST00000460264 CYP4F22Q6NT55 531 aa23.78■■□□□ 1.4
COL5A1-203ENST00000460264 OGFOD1Q8N543 542 aa23.78■■□□□ 1.4
COL5A1-203ENST00000460264 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
COL5A1-203ENST00000460264 RIPOR2Q9Y4F9 1068 aa23.78■■□□□ 1.4
COL5A1-203ENST00000460264 ARAP2Q8WZ64 1704 aa23.77■■□□□ 1.4
COL5A1-203ENST00000460264 IL1R1P14778 569 aa23.77■■□□□ 1.4
COL5A1-203ENST00000460264 COL13A1Q5TAT6 717 aaPredicted RBP23.77■■□□□ 1.4
COL5A1-203ENST00000460264 HHIPL1Q96JK4 782 aa23.77■■□□□ 1.4
COL5A1-203ENST00000460264 KIF16BQ96L93 1317 aa23.77■■□□□ 1.4
COL5A1-203ENST00000460264 PITPNM2Q9BZ72 1349 aa23.77■■□□□ 1.4
COL5A1-203ENST00000460264 UBE4AQ14139 1066 aa23.76■■□□□ 1.39
COL5A1-203ENST00000460264 MROH5Q6ZUA9 1318 aa23.76■■□□□ 1.39
COL5A1-203ENST00000460264 ECM29Q5VYK3 1845 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 FOXN1O15353 648 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 MMP14P50281 582 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 GRM1Q13255 1194 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 NBPF9Q3BBW0 867 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 KIAA0825Q8IV33 1275 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 WBP1LQ9NX94 342 aa23.75■■□□□ 1.39
COL5A1-203ENST00000460264 HNRNPUQ00839 825 aaKnown RBP eCLIP23.74■■□□□ 1.39
COL5A1-203ENST00000460264 LRRC24Q50LG9 513 aa23.74■■□□□ 1.39
COL5A1-203ENST00000460264 IFFO2Q5TF58 517 aa23.74■■□□□ 1.39
COL5A1-203ENST00000460264 CERS5Q8N5B7 392 aa23.74■■□□□ 1.39
COL5A1-203ENST00000460264 WNT10BO00744 389 aa23.73■■□□□ 1.39
COL5A1-203ENST00000460264 UBTFL1P0CB47 393 aaPredicted RBP23.73■■□□□ 1.39
COL5A1-203ENST00000460264 KLHDC4Q8TBB5 520 aa23.73■■□□□ 1.39
COL5A1-203ENST00000460264 AIDAQ96BJ3 306 aa23.73■■□□□ 1.39
COL5A1-203ENST00000460264 CDCA5Q96FF9 252 aa23.73■■□□□ 1.39
COL5A1-203ENST00000460264 GBA2Q9HCG7 927 aaPredicted RBP23.73■■□□□ 1.39
COL5A1-203ENST00000460264 MAP2K1Q02750 393 aaPredicted RBP23.72■■□□□ 1.39
COL5A1-203ENST00000460264 METTL24Q5JXM2 366 aa23.72■■□□□ 1.39
COL5A1-203ENST00000460264 VGLL2Q8N8G2 317 aa23.72■■□□□ 1.39
COL5A1-203ENST00000460264 ARHGAP45Q92619 1136 aa23.72■■□□□ 1.39
COL5A1-203ENST00000460264 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
COL5A1-203ENST00000460264 PAPPA2Q9BXP8 1791 aa23.72■■□□□ 1.39
COL5A1-203ENST00000460264 SASH1O94885 1247 aa23.71■■□□□ 1.39
COL5A1-203ENST00000460264 GYG1P46976 350 aa23.71■■□□□ 1.39
COL5A1-203ENST00000460264 HUNKP57058 714 aa23.71■■□□□ 1.39
COL5A1-203ENST00000460264 AOC2O75106 756 aa23.7■■□□□ 1.38
COL5A1-203ENST00000460264 RFX5P48382 616 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 518.3 ms