RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 UBE4AQ14139 1066 aa13.45□□□□□ -0.26
CCDC12-204ENST00000460035 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
CCDC12-204ENST00000460035 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
CCDC12-204ENST00000460035 FZD9O00144 591 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 ECE2O60344 883 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 KLRK1P26718 216 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 TFCP2Q12800 502 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
CCDC12-204ENST00000460035 GJA3Q9Y6H8 435 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
CCDC12-204ENST00000460035 RAD17O75943 681 aa13.43□□□□□ -0.26
CCDC12-204ENST00000460035 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
CCDC12-204ENST00000460035 SLC5A1P13866 664 aa13.43□□□□□ -0.26
CCDC12-204ENST00000460035 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
CCDC12-204ENST00000460035 ZNF541Q9H0D2 1346 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
CCDC12-204ENST00000460035 GLTPD2A6NH11 291 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 APBB1O00213 710 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 DDNO94850 711 aaPredicted RBP13.42□□□□□ -0.26
CCDC12-204ENST00000460035 FGFR2P21802 821 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 GYG1P46976 350 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 CXCL9Q07325 125 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 TNIP1Q15025 636 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 CAVIN4Q5BKX8 364 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 LPIN2Q92539 896 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 COA1Q9GZY4 146 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
CCDC12-204ENST00000460035 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 YDJCA8MPS7 323 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 SASH1O94885 1247 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 HIBADHP31937 336 aaKnown RBP13.41□□□□□ -0.26
CCDC12-204ENST00000460035 TIMM10P62072 90 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
CCDC12-204ENST00000460035 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
CCDC12-204ENST00000460035 ECM29Q5VYK3 1845 aa13.41□□□□□ -0.26
CCDC12-204ENST00000460035 ZNF609O15014 1411 aa13.4□□□□□ -0.26
CCDC12-204ENST00000460035 BCAMP50895 628 aa13.4□□□□□ -0.26
CCDC12-204ENST00000460035 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
CCDC12-204ENST00000460035 FAM84BQ96KN1 310 aaPredicted RBP13.4□□□□□ -0.26
CCDC12-204ENST00000460035 RRAGCQ9HB90 399 aa13.4□□□□□ -0.26
CCDC12-204ENST00000460035 A0A1B0GUL7 405 aa13.39□□□□□ -0.27
CCDC12-204ENST00000460035 PSMD14O00487 310 aa13.39□□□□□ -0.27
CCDC12-204ENST00000460035 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
CCDC12-204ENST00000460035 GORABQ5T7V8 394 aa13.39□□□□□ -0.27
CCDC12-204ENST00000460035 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
CCDC12-204ENST00000460035 GPC2Q8N158 579 aa13.39□□□□□ -0.27
CCDC12-204ENST00000460035 GPR108Q9NPR9 543 aa13.39□□□□□ -0.27
CCDC12-204ENST00000460035 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
CCDC12-204ENST00000460035 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 IL1R1P14778 569 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 ADORA1P30542 326 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 GTF2IP78347 998 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
CCDC12-204ENST00000460035 IQSEC3Q9UPP2 1182 aaPredicted RBP13.38□□□□□ -0.27
CCDC12-204ENST00000460035 MYH7P12883 1935 aa13.38□□□□□ -0.27
CCDC12-204ENST00000460035 MYH2Q9UKX2 1941 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 ZBTB22O15209 634 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-204ENST00000460035 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-204ENST00000460035 TNNI3KQ59H18 835 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
CCDC12-204ENST00000460035 RHPN1Q8TCX5 695 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 KIF1BPQ96EK5 621 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 DCTPP1Q9H773 170 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 IL1RAPL2Q9NP60 686 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
CCDC12-204ENST00000460035 JAG2Q9Y219 1238 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-204ENST00000460035 FPGT-TNNI3KV9GXZ4 949 aa13.37□□□□□ -0.27
CCDC12-204ENST00000460035 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
CCDC12-204ENST00000460035 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
CCDC12-204ENST00000460035 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-204ENST00000460035 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-204ENST00000460035 STRIP1Q5VSL9 837 aa13.36□□□□□ -0.27
CCDC12-204ENST00000460035 CCDC8Q9H0W5 538 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-204ENST00000460035 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-204ENST00000460035 DOCK2Q92608 1830 aa13.36□□□□□ -0.27
CCDC12-204ENST00000460035 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms