RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
RFX3-210ENST00000457373 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 PUS3Q9BZE2 481 aaKnown RBP12.62□□□□□ -0.39
RFX3-210ENST00000457373 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
RFX3-210ENST00000457373 ANKRD2Q9GZV1 360 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 LTBP1Q14766 1721 aa12.62□□□□□ -0.39
RFX3-210ENST00000457373 TAF5LO75529 589 aa12.61□□□□□ -0.39
RFX3-210ENST00000457373 MS4A1P11836 297 aa12.61□□□□□ -0.39
RFX3-210ENST00000457373 DBNDD1Q9H9R9 158 aa12.61□□□□□ -0.39
RFX3-210ENST00000457373 GJA3Q9Y6H8 435 aa12.61□□□□□ -0.39
RFX3-210ENST00000457373 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
RFX3-210ENST00000457373 PYGBP11216 843 aa12.6□□□□□ -0.39
RFX3-210ENST00000457373 KCNJ4P48050 445 aa12.6□□□□□ -0.39
RFX3-210ENST00000457373 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
RFX3-210ENST00000457373 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
RFX3-210ENST00000457373 LEMD3Q9Y2U8 911 aa12.6□□□□□ -0.39
RFX3-210ENST00000457373 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
RFX3-210ENST00000457373 A0A1B0GUL6 1792 aa12.6□□□□□ -0.39
RFX3-210ENST00000457373 SNAP23O00161 211 aa12.59□□□□□ -0.39
RFX3-210ENST00000457373 KIF3CO14782 793 aa12.59□□□□□ -0.39
RFX3-210ENST00000457373 ECE2O60344 883 aa12.59□□□□□ -0.39
RFX3-210ENST00000457373 GNAI2P04899 355 aa12.59□□□□□ -0.39
RFX3-210ENST00000457373 RFX5P48382 616 aaPredicted RBP12.59□□□□□ -0.39
RFX3-210ENST00000457373 LRRC24Q50LG9 513 aa12.59□□□□□ -0.39
RFX3-210ENST00000457373 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
RFX3-210ENST00000457373 ZNF804BA4D1E1 1349 aa12.59□□□□□ -0.39
RFX3-210ENST00000457373 YDJCA8MPS7 323 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 ZBTB7BO15156 539 aaPredicted RBP12.58□□□□□ -0.4
RFX3-210ENST00000457373 RAD17O75943 681 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 CXCL9Q07325 125 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 C16orf71Q8IYS4 520 aaPredicted RBP12.58□□□□□ -0.4
RFX3-210ENST00000457373 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 C1orf115Q9H7X2 142 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 COG6Q9Y2V7 657 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 RIPOR2Q9Y4F9 1068 aa12.58□□□□□ -0.4
RFX3-210ENST00000457373 POTECB2RU33 542 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 SRGAP3O43295 1099 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 VEGFAP15692 232 aaPredicted RBP12.57□□□□□ -0.4
RFX3-210ENST00000457373 KLRK1P26718 216 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 PTPN12Q05209 780 aaKnown RBP12.57□□□□□ -0.4
RFX3-210ENST00000457373 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 TXNRD3Q86VQ6 643 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 GPC2Q8N158 579 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 SIL1Q9H173 461 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 KCNQ5Q9NR82 932 aa12.57□□□□□ -0.4
RFX3-210ENST00000457373 PA2G4Q9UQ80 394 aaKnown RBP12.57□□□□□ -0.4
RFX3-210ENST00000457373 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
RFX3-210ENST00000457373 UTRNP46939 3433 aa12.56□□□□□ -0.4
RFX3-210ENST00000457373 EYA2O00167 538 aa12.56□□□□□ -0.4
RFX3-210ENST00000457373 TNIP1Q15025 636 aa12.56□□□□□ -0.4
RFX3-210ENST00000457373 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
RFX3-210ENST00000457373 MROH5Q6ZUA9 1318 aa12.56□□□□□ -0.4
RFX3-210ENST00000457373 PSMD14O00487 310 aa12.55□□□□□ -0.4
RFX3-210ENST00000457373 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
RFX3-210ENST00000457373 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
RFX3-210ENST00000457373 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
RFX3-210ENST00000457373 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
RFX3-210ENST00000457373 HACL1Q9UJ83 578 aa12.55□□□□□ -0.4
RFX3-210ENST00000457373 SCN4AP35499 1836 aa12.55□□□□□ -0.4
RFX3-210ENST00000457373 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
RFX3-210ENST00000457373 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 IQCA1LA6NCM1 817 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 LMOD1P29536 600 aaPredicted RBP12.54□□□□□ -0.4
RFX3-210ENST00000457373 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 MTX1Q13505 466 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 UBE4AQ14139 1066 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 COA1Q9GZY4 146 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
RFX3-210ENST00000457373 TOMM70O94826 608 aa12.53□□□□□ -0.4
RFX3-210ENST00000457373 PDE8BO95263 885 aa12.53□□□□□ -0.4
RFX3-210ENST00000457373 EPHX2P34913 555 aa12.53□□□□□ -0.4
RFX3-210ENST00000457373 EPS15P42566 896 aa12.53□□□□□ -0.4
RFX3-210ENST00000457373 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
RFX3-210ENST00000457373 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
RFX3-210ENST00000457373 EAPPQ56P03 285 aaPredicted RBP12.53□□□□□ -0.4
RFX3-210ENST00000457373 TAF1DQ9H5J8 278 aaPredicted RBP12.53□□□□□ -0.4
RFX3-210ENST00000457373 CIAO1O76071 339 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
RFX3-210ENST00000457373 GYG1P46976 350 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 SCNN1DP51172 638 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
RFX3-210ENST00000457373 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 VGLL2Q8N8G2 317 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 CD209Q9NNX6 404 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 CEP126Q9P2H0 1117 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 PSME4Q14997 1843 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.41
RFX3-210ENST00000457373 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
RFX3-210ENST00000457373 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
RFX3-210ENST00000457373 VIL1P09327 827 aaKnown RBP12.51□□□□□ -0.41
RFX3-210ENST00000457373 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms